<?xml version="1.0" encoding="UTF-8"?><rss xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:content="http://purl.org/rss/1.0/modules/content/" xmlns:atom="http://www.w3.org/2005/Atom" version="2.0" xmlns:itunes="http://www.itunes.com/dtds/podcast-1.0.dtd" xmlns:googleplay="http://www.google.com/schemas/play-podcasts/1.0"><channel><title><![CDATA[Ion Genomics]]></title><description><![CDATA[Ion Genomics is a podcast and newsletter featuring news and analysis of sequencing, cancer testing, AI virtual cells, and more of the hottest topics in biology and precision medicine. ]]></description><link>https://www.iongenomics.bio</link><image><url>https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png</url><title>Ion Genomics</title><link>https://www.iongenomics.bio</link></image><generator>Substack</generator><lastBuildDate>Fri, 21 Aug 2026 12:02:36 GMT</lastBuildDate><atom:link href="https://www.iongenomics.bio/feed" rel="self" type="application/rss+xml"/><copyright><![CDATA[Andrew P. Han]]></copyright><language><![CDATA[en]]></language><webMaster><![CDATA[andrewphan351001@substack.com]]></webMaster><itunes:owner><itunes:email><![CDATA[andrewphan351001@substack.com]]></itunes:email><itunes:name><![CDATA[Andrew P. Han]]></itunes:name></itunes:owner><itunes:author><![CDATA[Andrew P. Han]]></itunes:author><googleplay:owner><![CDATA[andrewphan351001@substack.com]]></googleplay:owner><googleplay:email><![CDATA[andrewphan351001@substack.com]]></googleplay:email><googleplay:author><![CDATA[Andrew P. Han]]></googleplay:author><itunes:block><![CDATA[Yes]]></itunes:block><item><title><![CDATA[Gilead Sciences Taps Deepcell to Codevelop AI Model of Chinese Hamster Ovary Cells]]></title><description><![CDATA[The companies plan to publish an AI model to speed identification of antibody producer cell lines.]]></description><link>https://www.iongenomics.bio/p/gilead-sciences-taps-deepcell-to</link><guid isPermaLink="false">https://www.iongenomics.bio/p/gilead-sciences-taps-deepcell-to</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Thu, 20 Aug 2026 22:18:58 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>AI and biotech startup Deepcell said it is collaborating with Gilead Sciences to codevelop a custom AI foundation model for Chinese hamster ovary (CHO) cell morphology.</span></p><p><span>Under the collaboration, Deepcell will image Gilead&#8217;s CHO cell lines on its REM-I imaging platform and train the model to learn morphological structure without manual labeling. The companies plan to publish an open-weight version of the model for the broader research and bioprocessing community.</span></p><p><span>The model could provide an earlier read on cell line quality by learning directly from single-cell morphology. Financial and other details were not disclosed.</span></p><p><span>&#8220;Beyond scoring cell line quality, the REM-I platform gives teams a window into transfection efficiency, timing, and culture and media conditions, and those same insights may extend to monitoring cells in a bioreactor,&#8221; Deepcell CTO Mahyar Salek said in a statement. &#8220;We built REM-I to read biology that humans can&#8217;t, and a CHO foundation model puts that capability directly into the hands of process development scientists.&#8221;</span></p><p><span>The deal is the second AI and imaging partnership in as many weeks for Gilead, which announced a deal Aug. 14 with Israel&#8217;s Nucleai to support antibody-drug conjugate development in cancer therapy.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;2829d97d-fe24-4a4f-b70d-0c5af39a0187&quot;,&quot;caption&quot;:&quot;Nucleai said it is running an ongoing translational research collaboration with Gilead Sciences to support Gilead&#8217;s global antibody-drug conjugate (ADC) clinical development programs.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;lg&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Nucleai, Gilead Collaborate on Tissue Analysis in Cancer Therapy Development&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-14T18:48:11.751Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/nucleai-gilead-collaborate-on-tissue&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:211218464,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:false,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Pixelgen Technologies Closes $15.5 Million Series B Financing Round]]></title><description><![CDATA[The Swedish company will use the funds to expand global sales of its Proxiome Kit.]]></description><link>https://www.iongenomics.bio/p/pixelgen-technologies-closes-155</link><guid isPermaLink="false">https://www.iongenomics.bio/p/pixelgen-technologies-closes-155</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Thu, 20 Aug 2026 22:08:02 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Pixelgen Technologies said Aug. 20 it has closed an oversubscribed $15.5 million Series B financing round.</span></p><p><span>New investor Flat Capital led the round, joined existing investors Industrifonden and Navigare Ventures. Stockholm-based Pixelgen said it would use the funding to accelerate commercialization of its Proxiome Kit and expand into new markets around the world.</span></p><p><span>Pixelgen&#8217;s Proxiome Kit uses its proximity network assay to show researchers how proteins are </span><a href="https://www.genomeweb.com/business-news/pixelgen-customers-begin-collecting-data-spatial-layout-cell-surface-proteins"><span>grouped and organized on the surface of individual cells</span></a><span>.</span></p><p><span>Alongside the financing, Pixelgen is adding Flat Capital CEO Rickard El Tarzi and life sciences entrepreneur Ramon Felciano to its board of directors. El Tarzi previously served as chief strategy and product officer at Olink, now part of Thermo Fisher Scientific. Felciano founded Ingenuity Systems, an AI-driven genome interpretation company acquired by Qiagen in 2013 for $105 million and later served as that company&#8217;s CTO.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Bioptimus Partners With Cancer Research Horizons to Access Colorectal Cancer Data]]></title><description><![CDATA[The deal adds Cancer Research UK's S:CORT colorectal cancer dataset to Bioptimus' tissue atlas.]]></description><link>https://www.iongenomics.bio/p/bioptimus-partners-with-cancer-research</link><guid isPermaLink="false">https://www.iongenomics.bio/p/bioptimus-partners-with-cancer-research</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Thu, 20 Aug 2026 20:26:57 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Bioptimus, a Paris-based artificial intelligence and biotech company, said it has partnered with the UK&#8217;s Cancer Research Horizons to access a multimodal colorectal cancer dataset covering more than 1,750 patient profiles.</span></p><p><span>Under the terms of the deal, Bioptimus will use Stratification in COloRectal cancer Trial (S:CORT) data to train and evaluate its Spatial Tissue Embedding Learning Atlas (STELA) AI foundation model. The dataset, assembled from multiple UK patient cohorts, integrates as many as six data modalities per patient, pairing molecular and cellular profiling with longitudinal clinical outcomes.</span></p><p><span>&#8220;Building AI models that genuinely move the needle for cancer patients requires data of exceptional depth and quality,&#8221; said Jean-Philippe Vert, chief executive officer of Bioptimus. &#8220;The S:CORT dataset, with its rich combination of imaging, genomic, transcriptomic, and clinical data, is exactly the kind of resource that allows us to rigorously evaluate and continue the development of M-Optimus to deliver real-world clinical advancements.&#8221;</span></p><p><span>Bioptimus added that S:CORT data will serve as a key evaluation benchmark. Financial and other details were not disclosed.</span></p><p><span>Cancer Research Horizons is part of Cancer Research UK. The agreement is Bioptimus&#8217; third partnership under the STELA initiative since its launch five months ago.</span></p><p><span>In June, Bioptimus signed a similar agreement for access to gastrointestinal cancer data with France&#8217;s F&#233;d&#233;ration Francophone de Canc&#233;rologie Digestive (FFCD).</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;a1fb6436-02f0-4b5d-8edb-0e96f638443c&quot;,&quot;caption&quot;:&quot;French artificial intelligence startup Bioptimus has signed a partnership with the F&#233;d&#233;ration Francophone de Canc&#233;rologie Digestive (FFCD), a French academic cancer research organization, granting the Paris-based biotech access to a cohort of clinical trial data from more than 3,000 gastrointestinal (GI) cancer patients.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Bioptimus to Expand AI-Based Tissue Atlas with French GI Cancer Network &quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-06-30T17:00:34.402Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/bioptimus-to-expand-ai-based-tissue&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:204305608,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:false,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[10x Genomics, Parse Headed to Trial After Split Patent Rulings]]></title><description><![CDATA[An Aug. 19 ruling upheld invalidation of three 10x patents by the PTAB, but a different case is headed to trial after the judge declined Parse&#8217;s bid to nix other 10x IP.]]></description><link>https://www.iongenomics.bio/p/10x-genomics-parse-headed-to-trial</link><guid isPermaLink="false">https://www.iongenomics.bio/p/10x-genomics-parse-headed-to-trial</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Thu, 20 Aug 2026 19:50:28 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!5faQ!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Faa620597-571a-447d-aacf-62d026c8871e_3360x1880.jpeg" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>10x Genomics has had a mixed week in court, suffering defeat in an appeal to save three patents while surviving a bid from rival Parse Biosciences to invalidate key claims in three other patents held by 10x.</span></p><p><span>The latter decision means the two companies are headed to trial next week in a key case for the future of the single-cell sequencing technology market.</span></p><p><span>In an opinion issued Aug. 19, a three-judge panel from the US Court of Appeals for the Federal Circuit upheld the invalidation of three patents for single-cell sequencing technology held by 10x Genomics by the USPTO&#8217;s Patent Trial and Appeals Board (PTAB.)</span></p><p><span>PTAB invalidated US Patent Nos. 10,155,981; 10,240,197; and 10,697,013 after an </span><em><span>inter partes </span></em><span>review filed by Parse Biosciences, now part of Qiagen. Parse challenged the patents, all titled &#8220;Methods for analyzing nucleic acids from single cells,&#8221;  following 10x&#8217;s </span><a href="http://genomeweb.com/business-news/10x-genomics-sues-parse-bio-patent-infringement-seeks-injunction"><span>allegations of infringement in 2022</span></a><span>.</span></p><p><span>A Parse spokesperson said the company welcomed the decision while a 10x Genomics spokesperson declined to comment.</span></p><p><span>The Aug. 19 appellate decision closes one of the remaining avenues available to 10x as it seeks to apply pressure to Parse via the legal system. 10x could petition to have its case heard by the US Supreme Court, though it seems unlikely to be taken up.</span></p><p><span>Yet, the IP war between the single-cell sequencing companies rages on, as Parse was unsuccessful in its bid to knock down key claims of three other patents held by 10x in a different patent infringement suit between the parties.</span></p><p><span>Judge Christopher Burke of the US District Court for the District of Delaware on Aug. 18 denied a request from Parse for summary judgment to invalidate three single-cell patents acquired by 10x when it bought Scale Biosciences in 2025. Prior to the acquisition, Scale had sued Parse, alleging infringement of four patents.</span></p><p><span>Parse had already successfully argued for the complete invalidation of one of the patents at suit, in October 2025. More recently, Parse had asked Burke to invalidate certain claims in the other three. However, Burke suggested there was a dispute of material fact that a jury should decide.</span></p><p><span>The Parse spokesperson declined to comment on this case. A 10x spokesperson said the sides are preparing for a trial next week.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!5faQ!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Faa620597-571a-447d-aacf-62d026c8871e_3360x1880.jpeg" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!5faQ!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Faa620597-571a-447d-aacf-62d026c8871e_3360x1880.jpeg 424w, https://substackcdn.com/image/fetch/$s_!5faQ!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Faa620597-571a-447d-aacf-62d026c8871e_3360x1880.jpeg 848w, https://substackcdn.com/image/fetch/$s_!5faQ!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Faa620597-571a-447d-aacf-62d026c8871e_3360x1880.jpeg 1272w, https://substackcdn.com/image/fetch/$s_!5faQ!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Faa620597-571a-447d-aacf-62d026c8871e_3360x1880.jpeg 1456w" sizes="100vw"><img 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class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" stroke-width="1.5" stroke="var(--color-fg-primary)" stroke-linecap="round" stroke-linejoin="round" xmlns="http://www.w3.org/2000/svg"><g><path d="M2.53001 7.81595C3.49179 4.73911 6.43281 2.5 9.91173 2.5C13.1684 2.5 15.9537 4.46214 17.0852 7.23684L17.6179 8.67647M17.6179 8.67647L18.5002 4.26471M17.6179 8.67647L13.6473 6.91176M17.4995 12.1841C16.5378 15.2609 13.5967 17.5 10.1178 17.5C6.86118 17.5 4.07589 15.5379 2.94432 12.7632L2.41165 11.3235M2.41165 11.3235L1.5293 15.7353M2.41165 11.3235L6.38224 13.0882"></path></g></svg></button><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container view-image"><svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-maximize2 lucide-maximize-2"><polyline points="15 3 21 3 21 9"></polyline><polyline points="9 21 3 21 3 15"></polyline><line x1="21" x2="14" y1="3" y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">10x Genomics headquarters. Image credit: 10x Genomics.</figcaption></figure></div><p></p>]]></content:encoded></item><item><title><![CDATA[Japanese Lung Cancer Study to Use Pillar Biosciences’ Liquid Biopsy Test]]></title><description><![CDATA[The roughly 2,000-patient project is set to begin testing this month using Pillar's oncoReveal Essential+ liquid biopsy assay.]]></description><link>https://www.iongenomics.bio/p/japanese-lung-cancer-study-to-use</link><guid isPermaLink="false">https://www.iongenomics.bio/p/japanese-lung-cancer-study-to-use</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Thu, 20 Aug 2026 18:39:20 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Pillar Biosciences said Aug. 19 that its oncoReveal Essential+ liquid biopsy assay has been validated for use in genomic screening of blood-based samples from lung cancer patients participating in the LC-SCRUM-Asia project in Japan.</span></p><p><span>Following approval of a revision to the LC-SCRUM-Asia project protocol, testing should begin this month. Over two years, LSI Medience will perform testing for approximately 2,000 patients, using oncoReveal Essential+ to screen circulating cell-free DNA (cfDNA) and cell-free RNA (cfRNA) for genomic alterations.</span></p><p><span>&#8220;Rapid and reliable genomic testing is essential for identifying patients who may benefit from biomarker-driven clinical studies and emerging precision therapies,&#8221; Koichi Goto, a researcher on LC-SCRUM-Asia and an oncologist at Japan&#8217;s National Cancer Center Hospital East (NCCHE,) said in a statement. The test will provide the LC-SCRUM-Asia network &#8220;with a highly accurate and accessible liquid biopsy solution for analyzing cfDNA and cfRNA from patients with non-small cell lung cancer, while supporting the rapid turnaround needed for clinical research,&#8221; he added.</span></p><p><span>LC-SCRUM-Asia is a large-scale lung cancer genomic screening and clinical research network led by NCCHE.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Network Bio Emerges with $50M to Build AI Models, Partners with Nvidia]]></title><description><![CDATA[The company has already signed a $30 million codevelopment and licensing agreement with a &#8220;Fortune 100, top-10 healthcare company.&#8221;]]></description><link>https://www.iongenomics.bio/p/ai-startup-network-bio-launches-with</link><guid isPermaLink="false">https://www.iongenomics.bio/p/ai-startup-network-bio-launches-with</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Wed, 19 Aug 2026 23:12:51 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Network Bio, a startup building artificial intelligence models for use in personalized medicine, launched Aug. 19 with $50 million. The company also announced a partnership with Nvidia to build a model based on cell-free RNA sequences and a $30 million codevelopment and licensing agreement with an unnamed Fortune 100 healthcare company.</span></p><p><span>Investors include Section 32, Thiel Bio, Founders Fund, Breyer Capital, Blue Venture Fund, and JSL Health Capital, among others.</span></p><p><span>In a statement, Network Bio said it plans to use data from academic medical center biobanks to develop disease-specific AI models. The company has collaborations with Mass General Brigham, the University of Pennsylvania, and the University of Colorado Anschutz.</span></p><p><span>&#8220;No single academic medical center can capture the full complexity of human disease,&#8221; Kimberly Muller, chief innovation officer at CU Anschutz Innovations, said in a statement. &#8220;By bringing together biobanks from leading institutions with industry partners, Network Bio is creating a research resource that reflects diverse patient populations and supports discoveries that can translate into real-world clinical practice.&#8221;</span></p><p><span>Network Bio is based in Palo Alto, California and cofounded by Hani Goodarzi, a researcher at the Arc Institute, and CEO Asad Ali Ahmad and Chief Business Officer Raphael Potter, both formerly of nference, an AI-based clinical data software company.</span></p><p><span>Network&#8217;s Nvidia collaboration aims to build the first foundation model trained on cfRNA.</span></p><p><span>Network will combine its datasets from patient-derived tissues and paired blood samples linked to longitudinal clinical outcomes with Nvidia&#8217;s accelerated computing, Parabricks genomic software suite, and BioNeMo Recipes for model training.</span></p><p><span>Specifically the company plans to &#8220;scale training of Nexus, a self-supervised transformer trained on cfRNA expression profiles.&#8221;  It&#8217;ll also try to speed up cfRNA bioinformatics, including secondary analysis, alignment, quantification, and quality control.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Oxford Nanopore’s $35M Mystery Dx Cross-Licensing Deal: Newsletter Aug. 19, 2026]]></title><description><![CDATA[Nucleai and Gilead team up on ADCs, Natera partners with Germany&#8217;s Kupando, Freenome gets FDA breakthrough designation, a new FDA commish nominee, and more.]]></description><link>https://www.iongenomics.bio/p/oxford-nanopores-50m-mystery-dx-cross</link><guid isPermaLink="false">https://www.iongenomics.bio/p/oxford-nanopores-50m-mystery-dx-cross</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Wed, 19 Aug 2026 21:45:28 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><em>This story has been updated to correct the math on the headline deal amount and to include additional details about Oxford Nanopore&#8217;s cross-licensing partner.</em></p><p><span>Oxford Nanopore Technologies officially announced first-half financial results, largely matching preliminary figures released a month ago, but the real news was two deals reached since June 30 and disclosed yesterday.</span></p><p><span>The one with the biggest material impact is a new global intellectual property cross-licensing agreement with an unnamed diagnostics company. Oxford Nanopore will recognize approximately $20 million in licensing fees in the second half of this year, along with $15 million in committed product purchases over fiscal years 2027 and 2028, and an ongoing royalty on revenues from certain products incorporating the licensed IP in the low-to-mid single digits.</span></p><p><span>The company did not immediately respond to a request for additional information, understandable, given the time difference. </span><s><span>If I were forced to guess the identity of this partner, it&#8217;d be Danaher&#8217;s Cepheid. The companies expanded a collaboration for rapid bacterial and fungal pathogen identification earlier this year and plan to launch an early access program soon. But that&#8217;s just a guess.</span></s></p><p><span>The unnamed partner &#8220;did not have a prior relationship with Oxford Nanopore,&#8221; Canaccord Genuity Analyst Kyle Mikson wrote in a late-night Aug. 19 note to investors.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;fc805147-7de4-4656-9e5b-657d782dfa8d&quot;,&quot;caption&quot;:&quot;Cepheid and Oxford Nanopore Technologies (ONT) announced April 15 an expansion of their collaboration to develop a workflow for rapid bacterial and fungal pathogen identification, following a successful first phase of their partnership.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Cepheid, Oxford Nanopore Proceed With Infectious Disease Research Partnership&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-04-16T16:50:54.144Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/cepheid-oxford-nanopore-proceed-with&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:194427636,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:false,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p><span>In addition, Oxford Nanopore cemented its place with MyOme&#8217;s Zenith rare disease platform. Researchers from MyOme and Natera led publication of a study on implementation of nanopore sequencing for confirming copy number variants in a clinical setting, published in the </span><em><a href="https://pubmed.ncbi.nlm.nih.gov/37301971/"><span>Journal of Translational Medicine</span></a><span> </span></em><span>in 2023. Zenith has been launched in collaboration with Natera.</span></p><p><span>Oxford Nanopore also announced the appointments of Davide Manissero as chief medical officer this month and Conor McKechnie as chief marketing and communications officer come October.</span></p><p><span>Manissero was previously CMO at Denmark&#8217;s Radiometer and CMO at Qiagen from 2019 to 2024. McKechnie was previously VP of Marketing at Danaher&#8217;s Cytiva and spent more than a decade in communications and marketing at GE Healthcare.</span></p><div><hr></div><h4><em><strong><span>Ion Genomics News</span></strong></em></h4><div class="poll-embed" data-attrs="{&quot;id&quot;:1029905}" data-component-name="PollToDOM"></div><p class="button-wrapper" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe now&quot;,&quot;action&quot;:null,&quot;class&quot;:null}" data-component-name="ButtonCreateButton"><a class="button primary" href="https://www.iongenomics.bio/subscribe?"><span>Subscribe now</span></a></p><p>If you haven&#8217;t yet listened to last week&#8217;s podcast with my friend and fellow reporter Will Herkewitz, check out our discussion about technology and its place in fighting ongoing epidemics of ebola and tuberculosis.</p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;bf12a95b-93cc-4f62-ab1b-2262051439c4&quot;,&quot;caption&quot;:&quot;How are people fighting ongoing epidemics using genomics-based technologies such as PCR testing and mRNA vaccines in a world where funding from the US and other rich countries is on the decline?&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Technology, Trust, and Tuberculosis, with Journalist  Will Herkewitz&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-14T16:56:01.216Z&quot;,&quot;cover_image&quot;:&quot;https://substack-video.s3.amazonaws.com/video_upload/post/211198932/a0d7644e-f446-4173-a972-26068087d239/transcoded-1786726029.png&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/how-technology-and-trust-help-fight&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:211198932,&quot;type&quot;:&quot;podcast&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div><hr></div><h4><strong><span>Other genomics news</span></strong></h4><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;d9d9f106-a9fe-4d6c-8db6-6f77b06a6037&quot;,&quot;caption&quot;:&quot;Nucleai said it is running an ongoing translational research collaboration with Gilead Sciences to support Gilead&#8217;s global antibody-drug conjugate (ADC) clinical development programs.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Nucleai, Gilead Collaborate on Tissue Analysis in Cancer Therapy Development&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-14T18:48:11.751Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/nucleai-gilead-collaborate-on-tissue&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:211218464,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;07ec482d-13ad-431c-8091-4c48d3ba4755&quot;,&quot;caption&quot;:&quot;The FDA has granted Breakthrough Device Designation to SimpleScreen Lung, Freenome&#8217;s blood-based lung cancer screening test, the company said Aug. 12.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;FDA Grants Breakthrough Device Designation to Freenome's SimpleScreen Lung Test&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-12T21:47:36.563Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/fda-grants-breakthrough-device-designation&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210961766,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;00269497-6a79-4938-8bb4-f7d4a0bbc460&quot;,&quot;caption&quot;:&quot;Natera&#8217;s Latitude tissue-free assay for molecular residual disease will be used to monitor treatment response in a Phase 1 clinical trial of Kupando Therapeutics&#8217; lead immunotherapy candidate in patients with advanced skin cancers.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;lg&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Natera, Germany&#8217;s Kupando Partner to Track ctDNA Dynamics in Phase 1 Skin Cancer Trial&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-12T21:39:23.632Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/nateras-latitude-mrd-test-to-support&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210961507,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p>As reported by <em>GenomeWeb&#8217;s</em> Huanjia Zhang, researchers at the State University of New York at Albany have <a href="https://www.genomeweb.com/mass-spectrometry/suny-albany-researchers-develop-mass-spec-approach-direct-de-novo-rna-seq">developed a way to directly sequence RNA</a> using mass spectrometry. They published their study in <em><a href="https://academic.oup.com/nar/article/54/12/gkag654/8723636?login=false#567048569">Nucleic Acids Research</a> </em>in July. </p><p><span>UK-based </span><strong><span>Tagomics</span></strong><span> has launched LiquiPath, a cell-free DNA blood test for drug safety monitoring. LiquiPath combines Tagomics&#8217; epigenetic technology, Activace, with methylation data to trace circulating cell-free DNA back to its tissue of origin. Tagomics has also launched an early-access program with AstraZeneca already among its pharma partners.</span></p><h4><strong><span>Elsewhere on SubStack</span></strong></h4><p><span>More from Nava Whiteford at ASeq: DNA Electronics, a UK-based startup that has raised millions to build a DNA sequencer, may be shutting down, according to a LinkedIn post from a former employee.</span></p><div class="embedded-post-wrap" data-attrs="{&quot;id&quot;:211151334,&quot;url&quot;:&quot;https://aseq.substack.com/p/dnae-dead&quot;,&quot;publication_id&quot;:383801,&quot;embedding_publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;ASeq Newsletter&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!vuh3!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F78512d00-5692-439f-b1e4-5e7014c57c98_512x512.png&quot;,&quot;title&quot;:&quot;DNAe Dead&quot;,&quot;truncated_body_text&quot;:&quot;I&#8217;ve been hearing rumors that DNA electronics is dead for a while, but this is the first public post I&#8217;ve seen.&quot;,&quot;date&quot;:&quot;2026-08-14T16:30:29.176Z&quot;,&quot;like_count&quot;:1,&quot;comment_count&quot;:5,&quot;bylines&quot;:[{&quot;id&quot;:1887435,&quot;name&quot;:&quot;Nava Whiteford&quot;,&quot;handle&quot;:&quot;navawhiteford&quot;,&quot;previous_name&quot;:null,&quot;photo_url&quot;:&quot;https://bucketeer-e05bbc84-baa3-437e-9518-adb32be77984.s3.amazonaws.com/public/images/71dd849d-5944-411a-8100-81bb06e96501_450x450.jpeg&quot;,&quot;bio&quot;:&quot;Sequencing technologist&quot;,&quot;profile_set_up_at&quot;:&quot;2022-01-07T14:44:31.873Z&quot;,&quot;reader_installed_at&quot;:&quot;2023-11-05T20:34:12.477Z&quot;,&quot;publicationUsers&quot;:[{&quot;id&quot;:307384,&quot;user_id&quot;:1887435,&quot;publication_id&quot;:383801,&quot;role&quot;:&quot;admin&quot;,&quot;public&quot;:true,&quot;is_primary&quot;:true,&quot;publication&quot;:{&quot;id&quot;:383801,&quot;name&quot;:&quot;ASeq Newsletter&quot;,&quot;subdomain&quot;:&quot;aseq&quot;,&quot;custom_domain&quot;:null,&quot;custom_domain_optional&quot;:false,&quot;hero_text&quot;:&quot;ASeq is Nava Whiteford&#8217;s newsletter on DNA sequencing, protein sequencing, diagnostics, life-science tools, biotech company strategy, COGS. And all sorts of other biotech related fun!&quot;,&quot;logo_url&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/78512d00-5692-439f-b1e4-5e7014c57c98_512x512.png&quot;,&quot;author_id&quot;:1887435,&quot;primary_user_id&quot;:1887435,&quot;theme_var_background_pop&quot;:&quot;#EA410B&quot;,&quot;created_at&quot;:&quot;2021-06-14T00:49:42.113Z&quot;,&quot;email_from_name&quot;:null,&quot;copyright&quot;:&quot;Nava Whiteford&quot;,&quot;founding_plan_name&quot;:&quot;Founding 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Whiteford&quot;,&quot;founding_plan_name&quot;:null,&quot;community_enabled&quot;:true,&quot;invite_only&quot;:false,&quot;payments_state&quot;:&quot;disabled&quot;,&quot;language&quot;:null,&quot;explicit&quot;:false,&quot;homepage_type&quot;:&quot;newspaper&quot;,&quot;is_personal_mode&quot;:false,&quot;logo_url_wide&quot;:null}}],&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:100,&quot;status&quot;:{&quot;bestsellerTier&quot;:100,&quot;subscriberTier&quot;:null,&quot;leaderboard&quot;:null,&quot;vip&quot;:false,&quot;badge&quot;:{&quot;type&quot;:&quot;bestseller&quot;,&quot;tier&quot;:100},&quot;subscriber&quot;:null}}],&quot;utm_campaign&quot;:null,&quot;belowTheFold&quot;:true,&quot;type&quot;:&quot;newsletter&quot;,&quot;language&quot;:&quot;en&quot;,&quot;source&quot;:null}" data-component-name="EmbeddedPostToDOM"><a class="embedded-post" native="true" href="https://aseq.substack.com/p/dnae-dead?utm_source=substack&amp;utm_campaign=post_embed&amp;utm_medium=web&amp;embedding_publication_id=8301988"><div class="embedded-post-header"><img class="embedded-post-publication-logo" src="https://substackcdn.com/image/fetch/$s_!vuh3!,w_56,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F78512d00-5692-439f-b1e4-5e7014c57c98_512x512.png" loading="lazy"><span class="embedded-post-publication-name">ASeq Newsletter</span></div><div class="embedded-post-title-wrapper"><div class="embedded-post-title">DNAe Dead</div></div><div class="embedded-post-body">I&#8217;ve been hearing rumors that DNA electronics is dead for a while, but this is the first public post I&#8217;ve seen&#8230;</div><div class="embedded-post-cta-wrapper"><span class="embedded-post-cta">Read more</span></div><div class="embedded-post-meta">6 days ago &#183; 1 like &#183; 5 comments &#183; Nava Whiteford</div></a></div><p><span>DNAe did not respond to </span><em><span>Ion Genomics&#8217;</span></em><span> request for comment.</span></p><h4><strong><span>My Omics Reading List</span></strong></h4><p><span>Holley, G., Eggertsson, H.P., Kristmundsdottir, S. </span><em>et al.</em><span> </span><a href="https://doi.org/10.1038/s41586-026-10924-7"><span>&#8220;An Icelandic pangenome reference.&#8221;</span></a><span> </span><em>Nature</em><span>. Aug. 19, 2026. </span></p><div class="callout-block" data-callout="true"><p><span>Here we introduce two new methods to address reference bias: Emblask for pangenome construction and Weaver for mapping to pangenomes at scale. Emblask is a hybrid long- and short-read haplotype-resolved dual assembly pipeline for parent&#8211;offspring trio data.</span></p></div><p>&#8212;</p><p>Qiu <em>et al</em>. <a href="https://www.science.org/doi/10.1126/science.aea6187">&#8220;A cross-organ single-cell analysis of hypertension.&#8221;</a> <em>Science</em>. Aug. 13, 2026. </p><p>Working in mice and rats, the authors </p><div class="callout-block" data-callout="true"><p>developed an integrated single-cell atlas of hypertension and hypertensive end-organ damage across three widely used animal models representing major and complementary pathophysiological mechanisms of the disease. </p></div><p>&#8212;</p><p>Kinney, <em>et al</em>. <a href="https://www.nature.com/articles/s41467-026-74623-7">&#8220;UNCOVERseq enables sensitive and controlled gene editing off-target nomination across CRISPR-Cas modalities and systems.&#8221;</a> <em>Nature Communications. </em>Aug. 11, 2026.</p><div class="callout-block" data-callout="true"><p>Unbiased Nomination of CRISPR Off-target Variants using Enhanced RhPCR is an &#8220;improved <em>in cellulo</em> off-target nomination workflow that sensitively identifies rare off-target events using defined inputs and analytical process controls.&#8221;</p></div><h4><strong><span>Elsewhere on the internet</span></strong></h4><p>President Donald Trump has nominated Heidi Overton, a White House aide and physician, as FDA Commissioner. </p><p>From the <a href="https://www.reuters.com/world/trump-taps-white-house-adviser-overton-lead-fda-2026-08-19/">Reuters</a> article on her nomination: </p><blockquote><p><span>Chris Meekins, a former Trump health official who &#8203;is now an analyst at Raymond James, [...] wrote in an analyst note on Wednesday that Overton has &#8220;seemingly no real &#8203;experience running anything of consequence.</span></p><p><span>&#8220;Industry will view this &#8203;pick as extremely troublesome and FDA &#8288;career staff will continue to flee the agency in my view,&#8221; Meekins wrote. &#8220;Any progress made since Makary&#8217;s departure is likely to be quickly reversed if she is confirmed.&#8221;</span></p></blockquote><p>For those of us who missed it, the previous commish, Marty Makary, &#8220;resigned &#8204;in May after 13 months in the job, following clashes with White House officials over flavored vapes,&#8221; among other issues. </p>]]></content:encoded></item><item><title><![CDATA[Oxford Nanopore Inks Mystery Dx-Focused Cross-Licensing Agreement, Seals MyOme Integration]]></title><description><![CDATA[The UK-based nanopore sequencing company confirmed first-half revenue of &#163;116.7 million ($158.8 million.)]]></description><link>https://www.iongenomics.bio/p/oxford-nanopore-inks-mystery-dx-focused</link><guid isPermaLink="false">https://www.iongenomics.bio/p/oxford-nanopore-inks-mystery-dx-focused</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Wed, 19 Aug 2026 20:58:49 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!Rjs4!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Oxford Nanopore Technologies reported Aug. 18 that its first-half 2026 revenue rose 11 percent year over year, in line with  preliminary figures disclosed in July.</span></p><p><span>Alongside the interim results, the company announced a new global cross-licensing agreement with an unnamed diagnostics company and a deal with MyOme to incorporate nanopore sequencing into MyOme&#8217;s Zenith rare disease platform.</span></p><p><span>Under the diagnostics deal, Oxford Nanopore will recognize approximately $20 million in licensing fees in the second half of the year, along with $15 million in committed product purchases over fiscal years 2027 and 2028, and an ongoing net royalty calculated as a low-to-mid-single-digit percentage of revenues from certain products incorporating the licensed intellectual property.</span></p><p>The company did not immediately respond to a request for more information. Additional details of the MyOme deal were not disclosed.</p><p><span>The Oxford, UK-based nanopore sequencing company reported H1 2026 revenue of &#163;116.7 million, up from &#163;105.6 million in H1 2025, and up 12  percent year over year on a constant currency basis. The results came in below management expectations, as previously disclosed, due to weakness in China and the Middle East.</span></p><p><span>PromethIon products led growth, with revenue up 16 percent year over year to &#163;59.1 million from &#163;51.1 million a year ago, driven by strong demand for the P2i instrument. MinIon revenue grew 4 percent to &#163;28.8 million from &#163;27.6 million a year ago. Other revenue, comprising kits, services, and other devices, grew 7 percent to &#163;28.9 million. By product type, devices and services revenue grew 33 percent to &#163;37.0 million, while consumables revenue grew 3 percent to &#163;79.7 million, with growth muted by the completion of large research contracts and the decline in China.</span></p><p><span>By end market, research revenue grew 5 percent to &#163;76.0 million from &#163;72.1 million a year ago, reflecting large-scale cohort programs in Europe, the Middle East, Africa, and India (EMEAI) offset by the roll-off of Genomics England and UK National Institute for Health and Care Research (NIHR) contracts. Clinical was the fastest-growing segment, rising 35 percent to &#163;17.6 million from &#163;13.0 million a year ago, driven by growth across all geographic regions. Industrial revenue grew 6 percent to &#163;13.7 million, and biopharma grew 25.0 percent to &#163;9.5 million from &#163;7.6 million, driven by mRNA, direct RNA sequencing, and biomanufacturing quality control applications.</span></p><p><span>The EMEAI region delivered the strongest growth, with revenue up 25 percent to &#163;55.6 million from &#163;44.6 million a year ago, driven by clinical and biopharma momentum and large-scale cohort sequencing programs. Americas revenue grew 9 percent to &#163;39.1 million from &#163;36.0 million, though growth was slower than anticipated due to the timing of customer orders and contract wins; approximately &#163;900,000 of revenue slipped into Q3 due to shipment timing. Asia-Pacific revenue declined 12 percent to &#163;22.0 million from &#163;24.9 million, driven by a 16 percent decline in China due to enhanced export control restrictions and the completion of the PRECISE II contract in Singapore.</span></p><p><span>Comprehensive loss for the period was &#163;48.0 million, compared to a loss of &#163;71.8 million in H1 2025.</span></p><p><span>R&amp;D expenses fell 16 percent to &#163;36.9 million from &#163;44.1 million a year ago, reflecting a reduction in headcount from 2025. SG&amp;A expenses fell 9 percent to &#163;86.4 million from &#163;95.1 million a year ago.</span></p><p><span>As of June 30, Oxford Nanopore had &#163;234.5 million in cash, cash equivalents, and liquid investments.</span></p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!Rjs4!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!Rjs4!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 424w, https://substackcdn.com/image/fetch/$s_!Rjs4!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 848w, https://substackcdn.com/image/fetch/$s_!Rjs4!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 1272w, https://substackcdn.com/image/fetch/$s_!Rjs4!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 1456w" sizes="100vw"><img src="https://substackcdn.com/image/fetch/$s_!Rjs4!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg" width="501" height="334.1146978021978" data-attrs="{&quot;src&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg&quot;,&quot;srcNoWatermark&quot;:null,&quot;fullscreen&quot;:null,&quot;imageSize&quot;:null,&quot;height&quot;:971,&quot;width&quot;:1456,&quot;resizeWidth&quot;:501,&quot;bytes&quot;:null,&quot;alt&quot;:null,&quot;title&quot;:null,&quot;type&quot;:null,&quot;href&quot;:null,&quot;belowTheFold&quot;:true,&quot;topImage&quot;:false,&quot;internalRedirect&quot;:null,&quot;isProcessing&quot;:false,&quot;align&quot;:null,&quot;offset&quot;:false}" class="sizing-normal" alt="" srcset="https://substackcdn.com/image/fetch/$s_!Rjs4!,w_424,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 424w, https://substackcdn.com/image/fetch/$s_!Rjs4!,w_848,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 848w, https://substackcdn.com/image/fetch/$s_!Rjs4!,w_1272,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 1272w, https://substackcdn.com/image/fetch/$s_!Rjs4!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F723e6d5d-a5e7-4cd8-95fc-9750141ada9d_6000x4000.jpeg 1456w" sizes="100vw" loading="lazy"></picture><div class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" stroke-width="1.5" stroke="var(--color-fg-primary)" stroke-linecap="round" stroke-linejoin="round" xmlns="http://www.w3.org/2000/svg"><g><path d="M2.53001 7.81595C3.49179 4.73911 6.43281 2.5 9.91173 2.5C13.1684 2.5 15.9537 4.46214 17.0852 7.23684L17.6179 8.67647M17.6179 8.67647L18.5002 4.26471M17.6179 8.67647L13.6473 6.91176M17.4995 12.1841C16.5378 15.2609 13.5967 17.5 10.1178 17.5C6.86118 17.5 4.07589 15.5379 2.94432 12.7632L2.41165 11.3235M2.41165 11.3235L1.5293 15.7353M2.41165 11.3235L6.38224 13.0882"></path></g></svg></button><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container view-image"><svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-maximize2 lucide-maximize-2"><polyline points="15 3 21 3 21 9"></polyline><polyline points="9 21 3 21 3 15"></polyline><line x1="21" x2="14" y1="3" y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">Oxford Nanopore GridIon. Image credit: Oxford Nanopore Technologies.</figcaption></figure></div><p><span>Oxford Nanopore maintained its full-year 2026 constant currency revenue growth guidance of 16 to 20 percent, excluding the $20 million non-recurring cross-licensing fee. Including that fee, it expects full-year constant currency growth of approximately 23 to 27 percent.</span></p><p><span>Oxford nanopore also announced a long-range yearly revenue target of more than $700 million in 2030.</span></p><p><span>&#8220;Our next chapter is about harnessing the collective strength of Oxford Nanopore to deploy our differentiated technology seamlessly and at scale across an ever-expanding customer base,&#8221; </span>CEO Francis Van Parys said in a statement.<span> &#8220;Our focus is clear: to accelerate adoption in our fastest-growing end markets and realise our longer-term ambition to build Oxford Nanopore into a $1 billion-and-growing annual revenue business.&#8221;</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Nucleai, Gilead Collaborate on Tissue Analysis in Cancer Therapy Development]]></title><description><![CDATA[Nucleai is analyzing whole-slide images across multiple oncology studies to support Gilead's antibody-drug conjugate programs.]]></description><link>https://www.iongenomics.bio/p/nucleai-gilead-collaborate-on-tissue</link><guid isPermaLink="false">https://www.iongenomics.bio/p/nucleai-gilead-collaborate-on-tissue</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Fri, 14 Aug 2026 18:48:11 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Nucleai said it is running an ongoing translational research collaboration with Gilead Sciences to support Gilead&#8217;s global antibody-drug conjugate (ADC) clinical development programs.</span></p><p><span>As part of the expanded collaboration, announced Aug. 11, Nucleai has analyzed a large dataset of H&amp;E and immunohistochemistry whole-slide images from several clinical studies spanning multiple oncology indications, integrating the tissue analysis with clinical outcomes data.</span></p><p><span>&#8220;Precision oncology is entering a new phase, where understanding tissue architecture is becoming just as important as understanding molecular alterations,&#8221; Nuclei CEO Avi Veidman, said in a statement. &#8220;Tissue Intelligence is becoming a foundational capability for precision medicine, helping identify the patients most likely to benefit while enabling pharmaceutical companies to translate tissue biology into reproducible biomarkers that improve the speed and success of oncology drug development.&#8221;</span></p><p><span>Israel-based Nucleai&#8217;s platform combines pathology, spatial biology, and clinical outcomes data. In a statement, Nucleai said it has generated candidate spatial biomarkers and biological insights.</span></p><p><span>The Gilead collaboration is the latest partnership Nucleai has announced in the last year, including a project with the UK&#8217;s University of Glasgow on colorectal cancer biomarkers and a partnership with Sirona Dx on spatial proteomics.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Technology, Trust, and Tuberculosis, with Journalist  Will Herkewitz]]></title><description><![CDATA[A dispatch from the front lines of the new Ebola epidemic in the DRC and the fight against tuberculosis in the US.]]></description><link>https://www.iongenomics.bio/p/how-technology-and-trust-help-fight</link><guid isPermaLink="false">https://www.iongenomics.bio/p/how-technology-and-trust-help-fight</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Fri, 14 Aug 2026 16:56:01 GMT</pubDate><enclosure url="https://api.substack.com/feed/podcast/211198932/5a2fbb1d35c2cbb1a9366f0d9853311e.mp3" length="0" type="audio/mpeg"/><content:encoded><![CDATA[<p><span>How are people fighting ongoing epidemics using genomics-based technologies such as PCR testing and mRNA vaccines in a world where funding from the US and other rich countries is on the decline?</span></p><p><span>My guest this week, my dear friend and fellow journalist William Herkewitz, is reporting on the recent Ebola outbreak in the Democratic Republic of Congo as well as tuberculosis around the world. A former communications director for now defunct USAID in multiple African countries, he has seen firsthand how funding from the US helped keep people healthy and infectious disease at bay.</span></p><p>In the old funding regime, a USAID partner organization might have been in place to raise the alarm about a hemorrhagic fever that looks a lot like Ebola and that could have led to a faster response, Herkewitz told me.</p><blockquote><p>&#8220;And a much faster response for this outbreak absolutely could have been the difference [in avoiding] the trajectory we&#8217;re on now, which is maybe the largest Ebola outbreak in history, one that for sure is going to be going on for years.&#8221;</p></blockquote><p><span>We discuss what happens when dollars disappear, and with them, networks of people and trust. We also evaluate PCR, next-generation sequencing, and paper-based diagnostic tests in these remote and resource-limited settings.</span></p><p><span>For more of Will&#8217;s reporting, check out </span><em><span>The Rift Valley Dispatch</span></em><span>, also on Substack.</span></p><div class="embedded-publication-wrap" data-attrs="{&quot;id&quot;:9290610,&quot;embedding_publication_id&quot;:8301988,&quot;name&quot;:&quot;The Rift Valley Dispatch&quot;,&quot;logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!Vj-L!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fe55bd69d-fd34-4202-8dbf-064622118cd3_889x889.jpeg&quot;,&quot;base_url&quot;:&quot;https://www.theriftvalleydispatch.com&quot;,&quot;hero_text&quot;:&quot;A Newsletter About Global Disease, Medicine, and Money. Written by Kenya-based journalist, William Herkewitz.&quot;,&quot;author_name&quot;:&quot;The Rift Valley Dispatch&quot;,&quot;show_subscribe&quot;:true,&quot;logo_bg_color&quot;:&quot;#f6f6f6&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="EmbeddedPublicationToDOMWithSubscribe"><div class="embedded-publication show-subscribe"><a class="embedded-publication-link-part" native="true" href="https://www.theriftvalleydispatch.com?utm_source=substack&amp;utm_campaign=publication_embed&amp;utm_medium=web&amp;embedding_publication_id=8301988"><img class="embedded-publication-logo" src="https://substackcdn.com/image/fetch/$s_!Vj-L!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fe55bd69d-fd34-4202-8dbf-064622118cd3_889x889.jpeg" width="56" height="56" style="background-color: rgb(246, 246, 246);"><span class="embedded-publication-name">The Rift Valley Dispatch</span><div class="embedded-publication-hero-text">A Newsletter About Global Disease, Medicine, and Money. Written by Kenya-based journalist, William Herkewitz.</div></a><form class="embedded-publication-subscribe" method="GET" action="https://www.theriftvalleydispatch.com/subscribe?embedding_publication_id=8301988"><input type="hidden" name="source" value="publication-embed"><input type="hidden" name="autoSubmit" value="true"><input type="email" class="email-input" name="email" placeholder="Type your email..."><input type="submit" class="button primary" value="Subscribe"></form></div></div><p>The podcast is also available on Apple and Spotify. </p><div class="apple-podcast-container" data-component-name="ApplePodcastToDom"><iframe class="apple-podcast episode-list" data-attrs="{&quot;url&quot;:&quot;https://embed.podcasts.apple.com/us/podcast/ion-genomics-podcast/id1895321918&quot;,&quot;isEpisode&quot;:false,&quot;imageUrl&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/podcast_1895321918.jpg&quot;,&quot;title&quot;:&quot;Ion Genomics Podcast&quot;,&quot;podcastTitle&quot;:&quot;Ion Genomics Podcast&quot;,&quot;podcastByline&quot;:&quot;Andrew P. Han&quot;,&quot;duration&quot;:2913,&quot;numEpisodes&quot;:10,&quot;targetUrl&quot;:&quot;https://podcasts.apple.com/us/podcast/ion-genomics-podcast/id1895321918?uo=4&quot;,&quot;releaseDate&quot;:&quot;2026-08-14T10:30:00Z&quot;}" src="https://embed.podcasts.apple.com/us/podcast/ion-genomics-podcast/id1895321918" frameborder="0" allow="autoplay *; encrypted-media *;" allowfullscreen="true"></iframe></div><iframe class="spotify-wrap podcast" data-attrs="{&quot;image&quot;:&quot;https://i.scdn.co/image/ab6765630000ba8ae923e91446971b6e04e470a9&quot;,&quot;title&quot;:&quot;Ion Genomics Podcast&quot;,&quot;subtitle&quot;:&quot;Andrew P. Han&quot;,&quot;description&quot;:&quot;Podcast&quot;,&quot;url&quot;:&quot;https://open.spotify.com/show/1lUGEhJQPNcdD5d5BSSaTQ&quot;,&quot;belowTheFold&quot;:true,&quot;noScroll&quot;:false}" src="https://open.spotify.com/embed/show/1lUGEhJQPNcdD5d5BSSaTQ" frameborder="0" gesture="media" allowfullscreen="true" allow="encrypted-media" loading="lazy" data-component-name="Spotify2ToDOM"></iframe><div><hr></div><h4><span>Show Notes</span></h4><p><span>Will&#8217;s </span><em><span>New York Times</span></em><span> op-ed. </span><a href="https://www.nytimes.com/2025/06/29/opinion/usaid-ending.html"><span>&#8220;Why We Couldn&#8217;t Sell America on U.S.A.I.D.&#8221;</span></a></p><p><span>His appearance on MS NOW (formerly MSNBC) to discuss his op-ed:</span></p><div id="youtube2-J_19zd18QmU" class="youtube-wrap" data-attrs="{&quot;videoId&quot;:&quot;J_19zd18QmU&quot;,&quot;startTime&quot;:null,&quot;endTime&quot;:null}" data-component-name="Youtube2ToDOM"><div class="youtube-inner"><iframe src="https://www.youtube-nocookie.com/embed/J_19zd18QmU?rel=0&amp;autoplay=0&amp;showinfo=0&amp;enablejsapi=0" frameborder="0" loading="lazy" gesture="media" allow="autoplay; fullscreen" allowautoplay="true" allowfullscreen="true" width="728" height="409"></iframe></div></div><p><a href="https://www.genomeweb.com/molecular-diagnostics/rollout-5000-near-point-care-tb-test-systems-13-countries-begins-50m-funding"><span>&#8220;Rollout of 5,000 Near Point-of-Care TB Test Systems in 13 Countries Begins With $50M in Funding,&#8221;</span></a><span> by Madeleine Johnson</span></p><p>The beer I referenced in the opening anecdote about the bar that was closed on weekends, Zlaty Ba&#382;ant a.k.a. the Golden Pheasant.</p><p>https://www.beeradvocate.com/beer/profile/1195/3349/</p><p>Cover art: Colorized microscope image of Ebola virus. Image credit: CDC Global via Wikimedia Commons. </p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div>]]></content:encoded></item><item><title><![CDATA[FDA Grants Breakthrough Device Designation to Freenome's SimpleScreen Lung Test]]></title><description><![CDATA[The designation could speed FDA review of SimpleScreen Lung for high-risk adults not currently screened for lung cancer.]]></description><link>https://www.iongenomics.bio/p/fda-grants-breakthrough-device-designation</link><guid isPermaLink="false">https://www.iongenomics.bio/p/fda-grants-breakthrough-device-designation</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Wed, 12 Aug 2026 21:47:36 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>The FDA has granted Breakthrough Device Designation to SimpleScreen Lung, Freenome&#8217;s blood-based lung cancer screening test, the company said Aug. 12.</span></p><p><span>The designation applies to the proposed use of SimpleScreen Lung in adults ages 50 to 80 with at least a 20 pack-year smoking history who are not currently participating in guideline-recommended lung cancer screening. The test would be ordered by a healthcare provider and is designed to detect early signals of lung cancer from a standard blood draw.</span></p><p><span>&#8220;The Breakthrough Device Designation from the FDA recognizes the substantial unmet need for lung cancer screening and accelerates our path to bring SimpleScreen Lung to patients,&#8221; Freenome CEO Aaron Elliott said in a statement. &#8220;By identifying high-risk individuals who would benefit from low-dose computed tomography (LDCT), we believe our test will complement the current standard of care and improve detection rates. We continue to advance the clinical work necessary to submit SimpleScreen Lung for FDA review.&#8221;</span></p><p><span>SimpleScreen Lung builds on the methylation and next-generation sequencing platform underlying SimpleScreen CRC, Freenome&#8217;s colorectal cancer screening test that received FDA approval last month.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;d31b1d9b-246c-4e08-9be4-300abd5a221c&quot;,&quot;caption&quot;:&quot;The FDA has approved Freenome&#8217;s SimpleScreen CRC, a blood-based screening test for colorectal cancer in adults 45 and older at average risk.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;FDA Approves Freenome's SimpleScreen CRC Blood Test&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-07-27T21:55:45.524Z&quot;,&quot;cover_image&quot;:&quot;https://substackcdn.com/image/fetch/$s_!Kyt7!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F7cac0672-d8e5-4366-bb40-12b1f26f1b78_1481x1089.png&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/fda-approves-freenomes-simplescreen&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:208751322,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:false,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p><span>The lung test incorporates methylation and proteomics data; a positive result would be followed by LDCT  imaging, while a negative result would not rule out cancer.</span></p><p><span>Freenome said it has presented initial development data at the 2026 AACR Annual Meeting and is continuing evaluation through its prospective PROACT LUNG study.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Natera, Germany’s Kupando Partner to Track ctDNA Dynamics in Phase 1 Skin Cancer Trial]]></title><description><![CDATA[The test will monitor circulating tumor DNA dynamics in Kupando Therapeutics' Phase 1 trial of KUP-101 in patients with advanced skin cancers.]]></description><link>https://www.iongenomics.bio/p/nateras-latitude-mrd-test-to-support</link><guid isPermaLink="false">https://www.iongenomics.bio/p/nateras-latitude-mrd-test-to-support</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Wed, 12 Aug 2026 21:39:23 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Natera&#8217;s Latitude tissue-free assay for molecular residual disease will be used to monitor treatment response in a Phase 1 clinical trial of Kupando Therapeutics&#8217; lead immunotherapy candidate in patients with advanced skin cancers.</span></p><p><span>Under the collaboration, announced Aug. 12,  Latitude testing will provide circulating tumor DNA (ctDAN) dynamics at multiple timepoints as patients are treated with KUP-101.</span></p><p><span>&#8220;By leveraging the power of innate immune stimulation and the induction of trained immunity, KUP-101 represents a fundamentally different way of approaching hard-to-treat cancers,&#8221; Johanna Holldack, Kupando CEO and founder, said in a statement. &#8220;Natera&#8217;s Latitude test can provide valuable insights into treatment response dynamics, helping us better understand the molecular activity of this novel therapeutic approach and advance our clinical development program for patients with advanced solid tumors.&#8221;</span></p><p><span>KUP-101 from Germany-based Kupando is designed to activate the innate immune system and induce trained immunity. In a statement, Kupando said it has potential as a tissue-agnostic treatment across multiple solid tumor types, either alone or in combination with other therapies.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[PacBio CEO Change Fallout: Newsletter Aug. 11, 2026]]></title><description><![CDATA[Illumina settles with Carl Icahn, 10x Genomics gets sued, WuXi AppTec exposes DoD incompetence, inside a MinIon flow cell, Natera Q2 bonanza, and more.]]></description><link>https://www.iongenomics.bio/p/should-pacbio-and-oxford-nanopore</link><guid isPermaLink="false">https://www.iongenomics.bio/p/should-pacbio-and-oxford-nanopore</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Tue, 11 Aug 2026 21:31:54 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!Crct!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>The genomics world is still reacting to the change of CEO at Pacific Biosciences, announced last week ahead of second-quarter earnings.</span></p><p><span>Former Oxford Nanopore Technologies CTO Clive Brown wasted no time serving up food for thought:</span></p><div class="twitter-embed" data-attrs="{&quot;url&quot;:&quot;https://t.co/L5rWBUOlHd\&quot;>https://t.co/L5rWBUOlHd</a></p>&amp;mdash; Clive G. Brown (@The__Taybor) <a href=\&quot;https://x.com/The__Taybor/status/2085423509182837193?ref_src=twsrc%5Etfw\&quot;>August&quot;,&quot;full_text&quot;:&quot;I was mulling the merits of ONT reversing into pacb. The issue is the softbank debt. Softbank would have to buy into a deal that gives them better upside from combined growth over pacb alone. The customer base isn&#8217;t very overlapping. They are the only real long read plays (in the&quot;,&quot;username&quot;:&quot;The__Taybor&quot;,&quot;name&quot;:&quot;Clive G. Brown&quot;,&quot;profile_image_url&quot;:&quot;https://pbs.substack.com/profile_images/2040708205962268672/jbtxOafM_normal.jpg&quot;,&quot;date&quot;:&quot;2026-08-06T17:51:24.000Z&quot;,&quot;photos&quot;:[],&quot;quoted_tweet&quot;:{&quot;full_text&quot;:&quot;$PACB\nPacBio CEO steps down as Q2 loss widens\n\n- Mark Van Oene, previously PacBio&#8217;s chief operating officer, assumed the president and CEO role https://t.co/eiH5URhyMy&quot;,&quot;username&quot;:&quot;MarcJacksonLA&quot;,&quot;name&quot;:&quot;stock setter&quot;,&quot;profile_image_url&quot;:&quot;https://pbs.substack.com/profile_images/1958356920081031168/gAr_8qot_normal.jpg&quot;},&quot;reply_count&quot;:1,&quot;retweet_count&quot;:2,&quot;like_count&quot;:8,&quot;impression_count&quot;:3032,&quot;expanded_url&quot;:null,&quot;video_url&quot;:null,&quot;video_preview_media_key&quot;:null,&quot;belowTheFold&quot;:false}" data-component-name="Twitter2ToDOM"></div><p>The full post continues:</p><blockquote><p>&#8230; (in the west). The combined IP portfolio would be formidable and the combined entity - a juicier acquisition target. ONT gets on NASDAQ and likely a valuation uplift with $450M+ revenues. ONT shareholders would need to be in the driving seat. New board for ONT.</p></blockquote><p>Over on LinkedIn, genomics commentator Alex Dickinson picked up the idea and <a href="https://www.linkedin.com/posts/alexgdickinson_omg-what-a-great-idea-for-a-sleepy-saturday-share-7491971142732320768-6SiN/?utm_source=share&amp;utm_medium=member_desktop&amp;rcm=ACoAAAOXDDMBmUnw3kxfJ1KCzKZphLzy-5g_4JA">ran with it</a>, adding the following points, among others: </p><ol><li><p>PacBio and ONT have been duking it out over a small part of the total sequencing market for years. </p></li><li><p>The costs of operating as a single publicly-traded company would help the long-term economics. </p></li><li><p>A deal could give ONT shareholders a large stake in a company based and traded in the US, where there&#8217;s a lot more money sloshing around and more likely to invest in genomics. </p></li><li><p>Such a deal could circumvent PacBio&#8217;s debt issues (which are above my paygrade.)</p></li></ol><p><span>I don&#8217;t know if this helps the case to make this happen or hurts it, but my own thoughts are that PacBio and ONT have developed subniches within the long-read market resulting in mostly non-overlapping customer bases (excluding core labs.) Oxford Nanopore has done well with researchers who need speed and flexibility, including in metagenomic sequencing, especially in the field. PacBio had leveraged its accuracy to get into more clinical and human health-related applications.</span></p><p><span>Nanopore sequencing is finding a place in the clinic, again using speed as its differentiator, for rapid newborn whole-genome sequencing and intra-operative classification of brain tumors. Both are useful in telomere-to-telomere genome assemblies.</span></p><p><span>I recently spoke to new PacBio CEO Mark Van Oene for feature on the leadership transition (more on that next), we discussed whether it was important for PacBio to operate as a standalone company. He thought that it should at least stand alone. But could it and ONT benefit from standing together?</span></p><p><span>I published that feature story earlier today. According to both Van Oene and the man he replaced, Christian Henry, the succession was &#8220;always part of the plan&#8221; from the moment Henry brought Van Oene on board as chief operating officer.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;070b2451-ced7-4401-a57e-66c1e1fd503d&quot;,&quot;caption&quot;:&quot;Like a Hemingway bankruptcy, Mark Van Oene rose to the top job at Pacific Biosciences gradually, and then suddenly.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;New PacBio CEO Has Been Preparing for His Moment&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-11T18:39:07.543Z&quot;,&quot;cover_image&quot;:&quot;https://substackcdn.com/image/fetch/$s_!3LD7!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/new-pacbio-ceo-on-rise-this-was-always&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210794433,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:1,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p><span>I also delved into the challenge facing Van Oene:</span></p><div class="callout-block" data-callout="true"><p><span>Regardless of how he got here, [he] is now strapped into a two-stage rocket of Henry&#8217;s making. Over the next year or two, Van Oene will need to pull off a transition to new reusable consumables that allow PacBio a price per genome that is at least competitive with short-read sequencing. Following that, he&#8217;ll need to correctly time and execute the launch of PacBio&#8217;s next instrument, a production-scale long-read sequencer that can make use of the lower sequencing costs while meeting the demands of larger human sequencing endeavors, such as clinical and population sequencing.</span></p></div><h4><em><strong><span>Ion Genomics </span></strong></em><strong><span>News</span></strong></h4><p><strong><span>Check out this </span></strong><em><strong><span>Raw Reads</span></strong></em><strong><span> entry, a collection of everything 10x Genomics CEO and Cofounder Serge Saxonov said about AI on his Q2 call with Wall Street analysts:</span></strong></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;37176ff1-9119-450b-82f1-0b28414f57f2&quot;,&quot;caption&quot;:&quot;Raw Reads is a series of refined, comprehensive transcripts of conversations from leading figures covered by Ion Genomics.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Raw Reads: AI Trends with 10x Genomics CEO Serge Saxonov&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-10T12:30:06.508Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/raw-reads-10x-genomics-ceo-on-ai&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210276763,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p class="button-wrapper" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe now&quot;,&quot;action&quot;:null,&quot;class&quot;:null}" data-component-name="ButtonCreateButton"><a class="button primary" href="https://www.iongenomics.bio/subscribe?"><span>Subscribe now</span></a></p><div><hr></div><h4><strong><span>Other genomics news</span></strong></h4><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;2c4cd473-aa60-47a2-96a0-14d3dda87cdf&quot;,&quot;caption&quot;:&quot;Illumina has reached a settlement with billionaire investor Carl Icahn and other shareholders in a lawsuit over the company&#8217;s disputed reacquisition of Grail, according to an Aug. 7 filing with the US Securities and Exchange Commission.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;Illumina Settles Icahn-Led Shareholder Suit Over Grail Saga&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-10T20:16:22.204Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/illumina-settles-icahn-led-shareholder&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210658354,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;27d30a6a-bb81-43fb-b09f-9ed9fed8bb86&quot;,&quot;caption&quot;:&quot;Natera said on Aug. 6 that its second quarter revenue rose 38 percent year over year, driven by strength in its Signatera test.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot; Natera Q2 Revenue Jumps 38 Percent, Company Raises Full-Year Outlook by $100 Million&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-07T18:41:50.734Z&quot;,&quot;cover_image&quot;:&quot;https://substackcdn.com/image/fetch/$s_!XaiA!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/natera-shares-jump-20-percent-on&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210260763,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;50bf0744-422e-4651-ae0a-9d1ddec02a93&quot;,&quot;caption&quot;:&quot;This story has been updated to correctly identify 10x&#8217;s CFO as Adam Taich, not Adam Laponis, who is CFO at Twist Bioscience.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;md&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;10x Genomics Q2 Revenue Falls 13 Percent on Decline in Patent Suit Windfalls&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-07T13:03:30.954Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/10x-genomics-q2-revenue-falls-13&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210166627,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p><span>Speaking of 10x: </span><strong><span>Spatial Genomics,</span></strong><span> a company commercializing sequential fluorescence in situ hybridization (seqFISH) technology, and CalTech, where researcher Long Cai developed the tech, have </span><a href="https://www.courtlistener.com/docket/73721528/1/spatial-genomics-inc-v-10x-genomics-inc/"><span>sued 10x Genomics in US Federal court</span></a><span>, alleging patent infringement.</span></p><p><span>Specifically, the plaintiffs allege that 10x&#8217;s Xenium spatial analysis instrument infringes several patents, including US Patent No. 10,457,980 titled &#8220;Multiplex Labeling of Molecules by Sequential Hybridization Barcoding.&#8221;</span></p><p><span>The plaintiffs have asked the court to file their complaint under seal. A redacted version of the complaint says Spatial Genomics sells an instrument called GenePS, based on seqFISH technology; however, it&#8217;s unclear how many boxes the company has placed.</span></p><p><span>According to a paper published earlier this year in Chemical &amp; Biomedical Imaging, seqFISH offers the ability to:</span></p><blockquote><p><span>connect dynamic phenotypes exhibited by individual cells with their corresponding genotypes. However, widespread adoption of this strategy has been constrained by two technical challenges: (1) compromised </span><em><span>in situ</span></em><span> genotyping efficiency due to nonspecific fluorescent probe aggregation in confined microfluidic growth chambers, and (2) the reliance on high-copy-number plasmids to ensure genotyping sensitivity, which often distorts dynamic phenotypes and perturbs normal physiology during live-cell imaging.</span></p></blockquote><p><strong><span>Broken String Biosciences</span></strong><span> has launched an extension of its INDUCE-seq technology to support adenine base editing workflows. The company has also launched an early access program where it plans to work with researchers developing genome-editing therapies.</span></p><h4><strong><span>Elsewhere on SubStack</span></strong></h4><p><span>Nava Whiteford brings us a view of the electronic guts of a MinIon flow cell, based on a tear-down video from YouTube.</span></p><div class="embedded-post-wrap" data-attrs="{&quot;id&quot;:210582820,&quot;url&quot;:&quot;https://aseq.substack.com/p/minion-disassemblyteardown&quot;,&quot;publication_id&quot;:383801,&quot;embedding_publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;ASeq Newsletter&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!vuh3!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F78512d00-5692-439f-b1e4-5e7014c57c98_512x512.png&quot;,&quot;title&quot;:&quot;MinION Disassembly/Teardown&quot;,&quot;truncated_body_text&quot;:&quot;Mike has posted a teardown of the MinION and flowcell over on Youtube.&quot;,&quot;date&quot;:&quot;2026-08-10T16:31:51.597Z&quot;,&quot;like_count&quot;:3,&quot;comment_count&quot;:0,&quot;bylines&quot;:[{&quot;id&quot;:1887435,&quot;name&quot;:&quot;Nava Whiteford&quot;,&quot;handle&quot;:&quot;navawhiteford&quot;,&quot;previous_name&quot;:null,&quot;photo_url&quot;:&quot;https://bucketeer-e05bbc84-baa3-437e-9518-adb32be77984.s3.amazonaws.com/public/images/71dd849d-5944-411a-8100-81bb06e96501_450x450.jpeg&quot;,&quot;bio&quot;:&quot;Sequencing technologist&quot;,&quot;profile_set_up_at&quot;:&quot;2022-01-07T14:44:31.873Z&quot;,&quot;reader_installed_at&quot;:&quot;2023-11-05T20:34:12.477Z&quot;,&quot;publicationUsers&quot;:[{&quot;id&quot;:307384,&quot;user_id&quot;:1887435,&quot;publication_id&quot;:383801,&quot;role&quot;:&quot;admin&quot;,&quot;public&quot;:true,&quot;is_primary&quot;:true,&quot;publication&quot;:{&quot;id&quot;:383801,&quot;name&quot;:&quot;ASeq Newsletter&quot;,&quot;subdomain&quot;:&quot;aseq&quot;,&quot;custom_domain&quot;:null,&quot;custom_domain_optional&quot;:false,&quot;hero_text&quot;:&quot;ASeq is Nava Whiteford&#8217;s newsletter on DNA sequencing, protein sequencing, diagnostics, life-science tools, biotech company strategy, COGS. 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Whiteford&quot;,&quot;founding_plan_name&quot;:null,&quot;community_enabled&quot;:true,&quot;invite_only&quot;:false,&quot;payments_state&quot;:&quot;disabled&quot;,&quot;language&quot;:null,&quot;explicit&quot;:false,&quot;homepage_type&quot;:&quot;newspaper&quot;,&quot;is_personal_mode&quot;:false,&quot;logo_url_wide&quot;:null}}],&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:100,&quot;status&quot;:{&quot;bestsellerTier&quot;:100,&quot;subscriberTier&quot;:null,&quot;leaderboard&quot;:null,&quot;vip&quot;:false,&quot;badge&quot;:{&quot;type&quot;:&quot;bestseller&quot;,&quot;tier&quot;:100},&quot;subscriber&quot;:null}}],&quot;utm_campaign&quot;:null,&quot;belowTheFold&quot;:true,&quot;type&quot;:&quot;newsletter&quot;,&quot;language&quot;:&quot;en&quot;,&quot;source&quot;:null}" data-component-name="EmbeddedPostToDOM"><a class="embedded-post" native="true" href="https://aseq.substack.com/p/minion-disassemblyteardown?utm_source=substack&amp;utm_campaign=post_embed&amp;utm_medium=web&amp;embedding_publication_id=8301988"><div class="embedded-post-header"><img class="embedded-post-publication-logo" src="https://substackcdn.com/image/fetch/$s_!vuh3!,w_56,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F78512d00-5692-439f-b1e4-5e7014c57c98_512x512.png" loading="lazy"><span class="embedded-post-publication-name">ASeq Newsletter</span></div><div class="embedded-post-title-wrapper"><div class="embedded-post-title">MinION Disassembly/Teardown</div></div><div class="embedded-post-body">Mike has posted a teardown of the MinION and flowcell over on Youtube&#8230;</div><div class="embedded-post-cta-wrapper"><span class="embedded-post-cta">Read more</span></div><div class="embedded-post-meta">10 days ago &#183; 3 likes &#183; Nava Whiteford</div></a></div><p><span>&#8220;As previously estimated this is likely a [bill of materials] cost in the </span><a href="https://aseq.substack.com/p/the-minion-flowcell-nanopore-sequencing"><span>$200 range</span></a><span>,&#8221; he wrote. That&#8217;s compared to the list price of $840 for a MinIon Flow Cell.</span></p><p><span>Over at </span><strong><span>BridgeCross Bio, Matt Marlowe</span></strong><span> reports that </span><strong><span>WuXi AppTec</span></strong><span> has scored an early win in its fight its inclusion on the so-called 1260H list recently issued by the US Department of Defense.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;4a4a8add-1aa7-49fd-ae51-479208b4ea8b&quot;,&quot;caption&quot;:&quot;This story has been updated to include WuXi AppTec&#8217;s lawsuit challenging the designation.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;US Department of Defense Adds Novogene, WuXi AppTech, Complete Genomics to Watchlist&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-06-17T20:04:48.014Z&quot;,&quot;cover_image&quot;:null,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/us-department-of-defense-adds-novogene&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:202486541,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="callout-block" data-callout="true"><p>On 7 August, US District Judge James Boasberg granted a preliminary injunction preventing the Department from enforcing WuXi&#8217;s designation as a &#8220;Chinese military company&#8221; while litigation continues. The court also rejected the Department&#8217;s request to pause the injunction pending an appeal&#8230;</p></div><p><span>According to the opinion, the case has revealed that a DoD report mistakenly said that a Chinese government-linked investment fund owned 5.2 percent of WuXi AppTec, when in reality that figure was percentage of the total fund allocated to shares in the company. </span></p><p><span>The fund appears to only own approximately $200,000 worth of shares, not 5 percent of the company, which would have been worth hundreds of millions of dollars.</span></p><p><span>Also, another piece of evidence used by the DoD turned out to be documents listing WuXi AppTec as a &#8220;third-party laboratory&#8221; by pharma giant Novo Nordisk as it sought to do business with China&#8217;s Ministry of Science and Technology.</span></p><div class="embedded-post-wrap" data-attrs="{&quot;id&quot;:210712308,&quot;url&quot;:&quot;https://bridgecrossbio.substack.com/p/wuxi-won-in-court-can-it-undo-the&quot;,&quot;publication_id&quot;:7877608,&quot;embedding_publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;BridgeCross Bio&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!0uC9!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F312705d7-e539-4700-9dc3-db82b72477d1_1250x1250.png&quot;,&quot;title&quot;:&quot;WuXi Won in Court. Can It Undo the Chill?&quot;,&quot;truncated_body_text&quot;:&quot;WuXi AppTec has won an important first round in its legal battle with the US Department of Defense.&quot;,&quot;date&quot;:&quot;2026-08-11T06:29:21.163Z&quot;,&quot;like_count&quot;:0,&quot;comment_count&quot;:0,&quot;bylines&quot;:[{&quot;id&quot;:103732947,&quot;name&quot;:&quot;Matt Marlowe&quot;,&quot;handle&quot;:&quot;bridgecrossbio&quot;,&quot;previous_name&quot;:&quot;Matt&quot;,&quot;photo_url&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/3e887af1-2caa-4e7c-b423-7472a3b09eee_791x791.jpeg&quot;,&quot;bio&quot;:&quot;Matt Marlowe is founder of BridgeCross Bio, a platform dedicated to reporting key China biotech trends. He also helps biotech companies and investors with branding, digital marketing, market intelligence, strategic positioning, &amp; partnering.&quot;,&quot;profile_set_up_at&quot;:&quot;2025-12-15T11:49:30.418Z&quot;,&quot;reader_installed_at&quot;:&quot;2026-02-02T21:56:34.013Z&quot;,&quot;publicationUsers&quot;:[{&quot;id&quot;:8038524,&quot;user_id&quot;:103732947,&quot;publication_id&quot;:7877608,&quot;role&quot;:&quot;admin&quot;,&quot;public&quot;:true,&quot;is_primary&quot;:true,&quot;publication&quot;:{&quot;id&quot;:7877608,&quot;name&quot;:&quot;BridgeCross Bio&quot;,&quot;subdomain&quot;:&quot;bridgecrossbio&quot;,&quot;custom_domain&quot;:null,&quot;custom_domain_optional&quot;:false,&quot;hero_text&quot;:&quot;Your Bridge to China Biotech&quot;,&quot;logo_url&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/312705d7-e539-4700-9dc3-db82b72477d1_1250x1250.png&quot;,&quot;author_id&quot;:103732947,&quot;primary_user_id&quot;:103732947,&quot;theme_var_background_pop&quot;:&quot;#FF6719&quot;,&quot;created_at&quot;:&quot;2026-02-02T19:58:17.226Z&quot;,&quot;email_from_name&quot;:null,&quot;copyright&quot;:&quot;Matt&quot;,&quot;founding_plan_name&quot;:null,&quot;community_enabled&quot;:true,&quot;invite_only&quot;:false,&quot;payments_state&quot;:&quot;disabled&quot;,&quot;language&quot;:null,&quot;explicit&quot;:false,&quot;homepage_type&quot;:&quot;newspaper&quot;,&quot;is_personal_mode&quot;:false,&quot;logo_url_wide&quot;:null}}],&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null,&quot;status&quot;:{&quot;bestsellerTier&quot;:null,&quot;subscriberTier&quot;:1,&quot;leaderboard&quot;:null,&quot;vip&quot;:false,&quot;badge&quot;:{&quot;type&quot;:&quot;subscriber&quot;,&quot;tier&quot;:1,&quot;accent_colors&quot;:null},&quot;subscriber&quot;:null}}],&quot;utm_campaign&quot;:null,&quot;belowTheFold&quot;:true,&quot;type&quot;:&quot;newsletter&quot;,&quot;language&quot;:&quot;en&quot;,&quot;source&quot;:null}" data-component-name="EmbeddedPostToDOM"><a class="embedded-post" native="true" href="https://bridgecrossbio.substack.com/p/wuxi-won-in-court-can-it-undo-the?utm_source=substack&amp;utm_campaign=post_embed&amp;utm_medium=web&amp;embedding_publication_id=8301988"><div class="embedded-post-header"><img class="embedded-post-publication-logo" src="https://substackcdn.com/image/fetch/$s_!0uC9!,w_56,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F312705d7-e539-4700-9dc3-db82b72477d1_1250x1250.png" loading="lazy"><span class="embedded-post-publication-name">BridgeCross Bio</span></div><div class="embedded-post-title-wrapper"><div class="embedded-post-title">WuXi Won in Court. Can It Undo the Chill?</div></div><div class="embedded-post-body">WuXi AppTec has won an important first round in its legal battle with the US Department of Defense&#8230;</div><div class="embedded-post-cta-wrapper"><span class="embedded-post-cta">Read more</span></div><div class="embedded-post-meta">10 days ago &#183; Matt Marlowe</div></a></div><p><span>However, damage has already been done. &#8220;In the weeks since publication, WuXi&#8217;s customers and suppliers have canceled contracts, terminated longstanding relationships, and moved their business to competitors,&#8221; the judge noted.</span></p><p><span>The incompetence on display certainly raises questions about other additions to the list. </span></p><h4><strong><span>My Omics Reading List</span></strong></h4><p>Eapen, <em>et al. &#8220;</em>An Integrated Spatial Multi-Omics Workflow for Sequential RNA and Protein Profiling in FFPE Tumor Tissue.&#8221;<strong> </strong><em>Cancer Research Communications. </em>Aug. 7, 2026.</p><div class="callout-block" data-callout="true"><p><span>Here, we present an integrated spatial multi-omics workflow that enables sequential mapping of hundreds of genes via the [10x Genomics] Xenium In Situ platform and over 40 protein markers via [Standard BioTools] Imaging Mass Cytometry technology on a single formalin-fixed, paraffin-embedded (FFPE) tissue section. </span></p></div><p>King, <em>et al. &#8220;</em><strong>Generative design of bacteriophages with genome language models.&#8221; </strong><em>Science</em>.<em> </em>Aug. 6, 2026.</p><p>Researchers at Stanford University and the Arc Institute used the Evo genomic language model to computationally design complete bacteriophage genomes from scratch, then tested them against <em>Escherichia coli</em> that had evolved resistance to a natural phage. </p><div class="callout-block" data-callout="true"><p>Experimental tests yielded 16 functional genomes with diverse sequences, structures, and fitness profiles. A cocktail of the generated bacteriophages rapidly overcame bacteria that had evolved resistance to a natural bacteriophage. This work lays a foundation for AI-guided design of biological function at the whole-genome scale.</p></div><p><strong><span>Elsewhere on the internet</span></strong></p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!Crct!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!Crct!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 424w, https://substackcdn.com/image/fetch/$s_!Crct!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 848w, https://substackcdn.com/image/fetch/$s_!Crct!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 1272w, https://substackcdn.com/image/fetch/$s_!Crct!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 1456w" sizes="100vw"><img src="https://substackcdn.com/image/fetch/$s_!Crct!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg" width="500" height="588" data-attrs="{&quot;src&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/f2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg&quot;,&quot;srcNoWatermark&quot;:null,&quot;fullscreen&quot;:null,&quot;imageSize&quot;:null,&quot;height&quot;:588,&quot;width&quot;:500,&quot;resizeWidth&quot;:null,&quot;bytes&quot;:null,&quot;alt&quot;:null,&quot;title&quot;:null,&quot;type&quot;:null,&quot;href&quot;:null,&quot;belowTheFold&quot;:true,&quot;topImage&quot;:false,&quot;internalRedirect&quot;:null,&quot;isProcessing&quot;:false,&quot;align&quot;:null,&quot;offset&quot;:false}" class="sizing-normal" alt="" srcset="https://substackcdn.com/image/fetch/$s_!Crct!,w_424,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 424w, https://substackcdn.com/image/fetch/$s_!Crct!,w_848,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 848w, https://substackcdn.com/image/fetch/$s_!Crct!,w_1272,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 1272w, https://substackcdn.com/image/fetch/$s_!Crct!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff2a2333d-caf2-41d8-b93d-528ae9bcec8f_500x588.jpeg 1456w" sizes="100vw" loading="lazy"></picture><div class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" 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y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a></figure></div>]]></content:encoded></item><item><title><![CDATA[New PacBio CEO Has Been Preparing for His Moment]]></title><description><![CDATA[Like a Hemingway bankruptcy, Mark Van Oene&#8217;s rise to the top job at PacBio was gradual and then sudden.]]></description><link>https://www.iongenomics.bio/p/new-pacbio-ceo-on-rise-this-was-always</link><guid isPermaLink="false">https://www.iongenomics.bio/p/new-pacbio-ceo-on-rise-this-was-always</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Tue, 11 Aug 2026 18:39:07 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!3LD7!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Like a Hemingway bankruptcy, Mark Van Oene rose to the top job at Pacific Biosciences gradually, and then suddenly.</span></p><p><span>&#8220;This was always the plan,&#8221; Van Oene told </span><em><span>Ion Genomics</span></em><span>, dating back to 2021 when ex-CEO Christian Henry recruited him to PacBio from Illumina. &#8220;The conversation from the beginning was, &#8216;Mark, come help me transform PacBio and round out your career and we&#8217;ll work through a succession plan when the timing&#8217;s right,&#8217;&#8221; he said.</span></p><p><span>According to Van Oene, that succession plan was officially put in place with the board last year. He took another step closer earlier this year when PacBio removed its VP of Global Sales, prompting Henry, who had been overseeing the company&#8217;s commercial operation, to swap responsibilities with Van Oene, who had been in charge of operations and R&amp;D. This swap was documented in a </span><a href="https://investor.pacificbiosciences.com/node/16176/html"><span>filing</span></a><span> with the US Securities and Exchange Commission.</span></p><p><span>When Van Oene and Henry cut PacBio&#8217;s payroll with yet another round of layoffs in recent weeks, they decided it was time to make the switch.</span></p><p><span>&#8220;The timing of the decision was more recent, but the plan was always there for this transition to happen here over the course of this year,&#8221; Van Oene said.</span></p><p><span>Given the layoffs &#8212;&#8211; the company&#8217;s third round in as many years &#8212;&#8211;  and the fact that they&#8217;d have to soon report second quarter revenue below the prior-year period and Wall Street&#8217;s expectations, it&#8217;s worth considering whether other forces were in play. After a year of recovery against a bad 2024, progress on revenue growth has stalled the past two quarters. However, whether Henry&#8217;s seat was actually getting hot, and where that heat may have been coming from, is unclear. Henry isn&#8217;t leaving the board yet and will continue to advise Van Oene in an official capacity until the end of the year.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;c4787b93-db5f-4f1c-9110-38ab254d02cf&quot;,&quot;caption&quot;:&quot;Pacific Biosciences said on Aug. 5 that Christian Henry has stepped down as CEO, effective immediately, to be replaced by Mark Van Oene, formerly the Chief Operating Officer.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;PacBio Confirms Layoffs, Gets New CEO as Q2 Revenue Disappoints&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-08-06T21:18:51.393Z&quot;,&quot;cover_image&quot;:&quot;https://substackcdn.com/image/fetch/$s_!wJL5!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/pacbio-q2-ceo-departs-layoffs-confirmed&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:210133899,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:false,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p><span>Regardless of how he got here, Van Oene is now strapped into a two-stage rocket of Henry&#8217;s making. Over the next year or two, Van Oene will need to pull off a transition to new reusable consumables that allow PacBio a price per genome that is at least competitive with short-read sequencing. Following that, he&#8217;ll need to correctly time and execute the launch of PacBio&#8217;s next instrument, a production-scale long-read sequencer that can make use of the lower sequencing costs while meeting the demands of larger human sequencing endeavors, such as clinical and population sequencing.</span></p><p><span>How he pilots this stretch will determine whether PacBio finally takes off or if it crashes back down.</span></p><p class="button-wrapper" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe now&quot;,&quot;action&quot;:null,&quot;class&quot;:null}" data-component-name="ButtonCreateButton"><a class="button primary" href="https://www.iongenomics.bio/subscribe?"><span>Subscribe now</span></a></p><p><span>For his part, Henry said he has &#8220;no regrets.&#8221; That includes the 2021 acquisition of Omniome &#8212;&#8211; which cost $316 million in cash and approximately $250 million in stock upfront, plus at least $96.2 million in cash milestones &#8212;&#8211; and the 2023 acquisition of Apton Biosciences for $110 million. These deals fed the launch of Onso, a benchtop, mid-throughput, short-read sequencing platform that performed poorly amidst strong competition. Earlier this year, PacBio sold the scraps of its short-read technology portfolio, mostly from Apton, to Illumina for just $48.1 million.</span></p><p><span>&#8220;The decision about believing in the short-read side didn&#8217;t play out the way we had hoped,&#8221; Henry told </span><em><span>Ion Genomics</span></em><span>. However, he defended the strategy behind those decisions. &#8220;If interest rates and the academic market hadn&#8217;t blown up, it likely would have worked.&#8221;</span></p><p><span>Kyle Mikson, a stock analyst at Canaccord Genuity who covers PacBio, agreed. &#8220;In the moment it was the time to make these aggressive decisions and high growth potential. Money was flying [around],&#8221; he said. &#8220;But looking back, stuff didn&#8217;t work out. You only get so many chances.&#8221;</span></p><p><span>While a steep price to pay, the ability to launch Onso along with Revio appears to have placed PacBio salespeople into more conversations and deal rooms. Those likely helped set the stage for new conversations Van Oene will have as he tries to capitalize on the move to cheaper pricing and higher-throughput, albeit only for long reads.</span></p><p><span>On their Q2 call with analysts, PacBio officials noted that the transition to the SPRQ-Nx reusable consumables is providing a drag on revenue, as customers work through stockpiles of older products.</span></p><p><span>At the same time, &#8220;customer enthusiasm for SPRQ-Nx has remained strong since full launch,&#8221; Van Oene said on the call. Customers are installing the software needed to facilitate usage of SPRQ-Nx and &#8220;many of our high-throughput customers are currently in the process of validating the new multi-use workflows in their own laboratories,&#8221; he added.</span></p><p><span>The high-throughput long-read instrument is coming soon. PacBio officials said that they&#8217;ll soon be &#8220;[moving] past development spending&#8221; on it. Van Oene added that he knows he needs to &#8220;keep it on track.&#8221;</span></p><p><span>&#8220;The challenge has always been the throughput of the technology and the economics,&#8221; Van Oene said. &#8220;We&#8217;re finally at that point with SPRQ-Nx, where it&#8217;s getting close enough that it&#8217;s getting people to pay attention to using our data for much larger scale projects.&#8221;</span></p><p><span>Van Oene has given a lot of thought to where PacBio is headed. He even took responsibility for the recent layoffs in marketing, saying he &#8220;really wanted to refocus the commercial energy towards the clinical opportunity we&#8217;re seeing for rare disease and whole genome sequencing in Europe.&#8221;</span></p><p><span>What he hasn&#8217;t yet given thought to is who might succeed him, whenever that time comes. &#8220;I am a huge fan of succession planning and developing talent from within,&#8221; he said. &#8220;So it will be a priority for me, but not immediately.&#8221;</span></p><p></p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!3LD7!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!3LD7!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 424w, https://substackcdn.com/image/fetch/$s_!3LD7!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 848w, https://substackcdn.com/image/fetch/$s_!3LD7!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 1272w, https://substackcdn.com/image/fetch/$s_!3LD7!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 1456w" sizes="100vw"><img src="https://substackcdn.com/image/fetch/$s_!3LD7!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg" width="455" height="255.9375" data-attrs="{&quot;src&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg&quot;,&quot;srcNoWatermark&quot;:null,&quot;fullscreen&quot;:null,&quot;imageSize&quot;:null,&quot;height&quot;:576,&quot;width&quot;:1024,&quot;resizeWidth&quot;:455,&quot;bytes&quot;:null,&quot;alt&quot;:&quot;Photo of Menlo Park headquarters building - PacBio&quot;,&quot;title&quot;:null,&quot;type&quot;:null,&quot;href&quot;:null,&quot;belowTheFold&quot;:true,&quot;topImage&quot;:false,&quot;internalRedirect&quot;:null,&quot;isProcessing&quot;:false,&quot;align&quot;:null,&quot;offset&quot;:false}" class="sizing-normal" alt="Photo of Menlo Park headquarters building - PacBio" title="Photo of Menlo Park headquarters building - PacBio" srcset="https://substackcdn.com/image/fetch/$s_!3LD7!,w_424,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 424w, https://substackcdn.com/image/fetch/$s_!3LD7!,w_848,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 848w, https://substackcdn.com/image/fetch/$s_!3LD7!,w_1272,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 1272w, https://substackcdn.com/image/fetch/$s_!3LD7!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F58ea4246-e289-4676-826f-67dbbf22b980_1024x576.jpeg 1456w" sizes="100vw" loading="lazy"></picture><div class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" stroke-width="1.5" stroke="var(--color-fg-primary)" stroke-linecap="round" stroke-linejoin="round" xmlns="http://www.w3.org/2000/svg"><g><path d="M2.53001 7.81595C3.49179 4.73911 6.43281 2.5 9.91173 2.5C13.1684 2.5 15.9537 4.46214 17.0852 7.23684L17.6179 8.67647M17.6179 8.67647L18.5002 4.26471M17.6179 8.67647L13.6473 6.91176M17.4995 12.1841C16.5378 15.2609 13.5967 17.5 10.1178 17.5C6.86118 17.5 4.07589 15.5379 2.94432 12.7632L2.41165 11.3235M2.41165 11.3235L1.5293 15.7353M2.41165 11.3235L6.38224 13.0882"></path></g></svg></button><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container view-image"><svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-maximize2 lucide-maximize-2"><polyline points="15 3 21 3 21 9"></polyline><polyline points="9 21 3 21 3 15"></polyline><line x1="21" x2="14" y1="3" y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">PacBio Headquarters. Image credit: PacBio</figcaption></figure></div><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Illumina Settles Icahn-Led Shareholder Suit Over Grail Saga]]></title><description><![CDATA[The no-payment settlement resolves one of several lingering shareholder suits over Illumina's contested Grail reacquisition.]]></description><link>https://www.iongenomics.bio/p/illumina-settles-icahn-led-shareholder</link><guid isPermaLink="false">https://www.iongenomics.bio/p/illumina-settles-icahn-led-shareholder</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Mon, 10 Aug 2026 20:16:22 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Illumina has reached a settlement with billionaire investor Carl Icahn and other shareholders in a lawsuit over the company&#8217;s disputed reacquisition of Grail, according to an Aug. 7 filing with the US Securities and Exchange Commission.</span></p><p><span>Under the agreement, the parties exchanged mutual releases with no payment by either side, and the case will be dismissed with prejudice, pending court approval.</span></p><p><span>According to the filing, the defendants continue to deny the allegations and any wrongdoing and agreed to the settlement to avoid the cost and uncertainty of continued litigation.</span></p><p><span>The lawsuit, filed in October 2023 in the Delaware Court of Chancery by Icahn Partners, challenged Illumina&#8217;s approximately $8 billion reacquisition of Grail, announced in September 2020. The plaintiffs alleged that Illumina&#8217;s board breached its fiduciary duties by closing the deal in August 2021 despite regulatory scrutiny in the US and Europe.</span></p><p><span>The European Commission (EC) later ordered Illumina to divest Grail and fined the company $476 million for closing the deal before EU merger review concluded, while the US Federal Trade Commission separately ordered a divestiture.</span></p><p><span>Illumina spun off Grail in June 2024 via a public offering of stock in the early-cancer detection company. Just a few months later, a European court ruled that the EC didn&#8217;t have jurisdiction to review the deal and the fine was rescinded.</span></p><p><span>The settlement resolves the Icahn-led suit but leaves three  other derivative lawsuits brought by a variety of retirement systems and pension funds still pending. The settlement also releases any potential claims by Illumina against Andrew Teno, who won election to Illumina&#8217;s board backed by Icahn, related to the sharing of confidential or privileged information during the litigation.</span></p><p><span>The Delaware Court of Chancery is scheduled to hold a hearing on Nov. 2.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div>]]></content:encoded></item><item><title><![CDATA[Raw Reads: AI Trends with 10x Genomics CEO Serge Saxonov]]></title><description><![CDATA[10x Genomics CEO Serge Saxonov mentioned AI's impact on his company many times during a conference call with Wall Street analysts.]]></description><link>https://www.iongenomics.bio/p/raw-reads-10x-genomics-ceo-on-ai</link><guid isPermaLink="false">https://www.iongenomics.bio/p/raw-reads-10x-genomics-ceo-on-ai</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Mon, 10 Aug 2026 12:30:06 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><em><span>Raw Reads is a series of refined, comprehensive transcripts of conversations from leading figures covered by Ion Genomics.</span></em></p><p class="button-wrapper" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe now&quot;,&quot;action&quot;:null,&quot;class&quot;:null}" data-component-name="ButtonCreateButton"><a class="button primary" href="https://www.iongenomics.bio/subscribe?"><span>Subscribe now</span></a></p><p><span>Single-cell sequencing has for the last several years already formed the </span><a href="https://www.iongenomics.bio/p/podcast-episode-2-ai-virtual-cell"><span>basis of AI foundation models of cells</span></a><span>, so it&#8217;s no surprise that 10x Genomics CEO and Cofounder Serge Saxonov is tracking that field closely.</span></p><p><span>I&#8217;ve spoken to him about it personally, but wasn&#8217;t sure if he&#8217;d commented so much about it publicly, as he did during the company&#8217;s second quarter financial results call. AI and its impact on 10x came up in both Saxonov&#8217;s prepared remarks as well as in the Q&amp;A session.</span></p><p><span>The following is everything Saxonov said about AI during the call:</span></p><p><strong><span>Serge Saxonov</span></strong><span>  (00:00)</span><em><span>  &#8212; CEO and Co-founder, 10x Genomics</span></em></p><p><span>&#8230; Over the past several quarters, products like Flex Apex have enabled a new generation of this work, particularly in biopharma and translational research. &#8230; A significant trend in single-cell has been an increase in large-scale perturbation experiments to map biological mechanisms and resolve causality. We&#8217;re finding that Flex Apex is becoming the standard assay for these experiments because of its scalability, robustness, and sensitivity. While we see significant flex Apex adoption across all customer segments, the uptake of Apex in biopharma has been particularly strong, driven by the application of perturbation screening to target identification.</span></p><p><span>The value of these studies is also increasing because of the progress in AI, which helps derive mechanistic insights from the large amounts of data generated by these experiments. As we have discussed before, we believe AI represents a significant and structural tailwind for our business. AI has enormous potential to transform biology and human health, but realizing that potential depends on generating vastly more of the right kinds of data. The key bottleneck for AI-driven progress in biology is the same bottleneck we identified when we started the company. Biology is incredibly complex; we understand only a tiny fraction of it, and solving that complexity requires measuring biological systems at massive scale and high resolution. We build single-cell and spatial technologies for precisely that purpose, which is why they are now being deployed by so many of our customers to train AI models.</span></p><div class="callout-block" data-callout="true"><p><span>In fact, AI as an influencer of demand is now becoming pervasive across our customer base. Today, most significant biological data generation efforts are conceived, at least in part, with the goal of training AI models.</span></p></div><p><span>On the academic side, there are multiple well-known pioneering efforts, such as those led by [BioHub] and the Arc Institute, dedicated to building virtual biology models, but we&#8217;re also seeing a wider shift, where more of basic scientific research entails training AI models. This shift is driven bottom up by decisions of individual scientists, as well as top down by philanthropic and government funding priorities, such as those outlined in recent proposals from the White House, a similar shift is also starting to happen by pharma with a rapid growth in AI-focused investments. Initially, much of the AI work in drug development has focused on the chemistry side of the process, on creating molecular interventions once a target is known.</span></p><p><span>Going forward, we expect increasing investments to be made in modeling biology at the cell and tissue level to unlock new targets and to predict drug response in patients. </span></p><div class="callout-block" data-callout="true"><p><span>We believe this is where the biggest bottlenecks are and where there are the greatest opportunities to transform drug development. </span></p></div><p><span>This work is also precisely what our tools enable, and why we anticipate a very large opportunity for our technologies over time. Most pharma companies now have strategic mandates to leverage AI to speed up drug development and increase the probability of success. At the same time, there is a rapidly growing number of biotech companies that seek to transform drug development using AI. More and more of them are focused on building sophisticated virtual models of human biology.</span></p><div class="callout-block" data-callout="true"><p><span>The vast majority of the companies building such models are using 10x single-cell and spatial technologies. </span></p></div><p><span>Customers overwhelmingly choose our products because they deliver the highest data quality, the largest scale, the widest biological context, and the most powerful multiomics capabilities. It has become increasingly clear in the field that all of these considerations are critical for building high-quality, generalizable, and useful models.</span></p><p><span>It should be noted that building better models is only a part of the AI story. For years, one of the biggest barriers to broader adoption of single-cell and spatial biology has been the bioinformatics expertise required to analyze increasingly rich datasets. Advances in agentic AI are beginning to remove that bottleneck. </span></p><div class="callout-block" data-callout="true"><p><span>Researchers who previously required dedicated computational experts are starting to analyze complex datasets through natural language interactions with AI agents. </span></p></div><p><span>We believe that will make single-cell and spatial analysis accessible to a much broader community of scientists, while increasing the value of the underlying data.</span></p><p><span>Together, these trends reinforce our conviction that single-cell and spatial biology are foundational to the future of basic science and drug discovery research. AI is increasing both the demand for high quality biological data and the ability of researchers to extract insights from that data. We believe those two forces will reinforce one another over the coming years.</span></p><p><span>&#8230;</span></p><p><span>Q&amp;A</span></p><p><strong><span>Kyle Mikson (Canaccord Genuity)</span></strong><span>  (17:31)</span></p><p><span>Hey guys, thanks for the questions. Congrats on the quarter. Multi-part question first on instruments. So, on Atera, great to hear all the demand and the interest and all that, but why remain conservative with that expectation for the second half&#8230; And secondly, just quickly, Serge, on AI, getting a lot of questions on your differentiation. You obviously have a lot of, you know, strong push there, but what really sets 10x apart, to directly benefit from that? And can you talk about any tangible revenue that you&#8217;ve recognized so far. Thanks.</span></p><p><strong><span>Saxonov</span></strong><span>  (18:28)</span></p><p><span>Thanks, Kyle. So just like for your first question on Atera, as we talked about in our prepared remarks, the demand has been extraordinary, and that&#8217;s not the constraint here. Right? The constraint is actually you know the manufacturing capacity to to ship the units this in the second half of the year, and we continue to expect to be able to ship 40, which is what we said in the last call, and still continues to be the case going forward.</span></p><p><span>[Editor&#8217;s note: Saxonov did not appear to address Mikson&#8217;s question about AI-related revenue.]</span></p><p><strong><span>Michael Ryskin (Bank of America)</span></strong><span>  (31:21)</span></p><p><span>Hey, thanks, guys. I want to go back to chromium and the single-cell platform. You know, chromium consumables are kind of flat, effectively quarter over quarter, just sequentially throughout the year. And instruments were a little bit on the lighter side. You know, I understand a lot of focus on spatial and maybe Xenium, but just we&#8217;ll have to dig into more to what you&#8217;re seeing there. You know, you&#8217;ve got things like the Billion Cell Atlas ongoing. You&#8217;ve got things like Perturb-seq ongoing. You&#8217;ve been talking about AI-driven drug discovery, which I think should tap into single-cell a lot. Why aren&#8217;t you seeing a little bit stronger numbers in Chromium? Is it all really tied to Flex, or is there anything else going on? And maybe if you could just quantify what you&#8217;re seeing, give us any tangible metric that we could sort of latch onto for AI-driven demand, just so we could sort of figure out, you know, how big it is for you right now in Q2. Thanks.</span></p><p><strong><span>Saxonov</span></strong><span>  (32:18)</span></p><p><span>Yeah, Mike, thanks for the question. So yeah, I mean, on single-cell. I would say the first order dynamic by far is that sort of transition that I talked about earlier, the rise of Flex Apex and transition of some of the other products to that to that assay. Again, it&#8217;s had a really nice pickup, a really nice momentum. We expect that to continue, and as a result of that, yeah, the the volume growth has been quite consistent and very robust and very encouraging, and a lot of the growth is in fact driven being driven by kind of emergence of AI applications and also more large scale experiments that involve larger cohorts and kind of distributed sample collection that that Flex is particularly great for.</span></p><p><span>That also has a bit of an influence, in fact, on instruments in the sense that because of the capability enabled by Flex of having this distributed sample collection and then centralization of processing, that naturally leads to more centralization to our service providers, to core labs, to big labs, which which kind of reduces the necessity to be placing instruments at every single lab, and also you know at this point we do have a lot of chromium instruments out there, so accessibility is generally not an issue at all.</span></p><p><span>So, overall, the dynamics around single-cell are very similar to what we&#8217;ve been describing for the last couple of quarters, and we expect that to continue in the over the rest of the year, and I do expect, like I said earlier, yeah, all the people or like large majority of the people who intend to transition to Apex will have largely done so by the end of the year, and that should put us in a good position to you know keep driving that sort of robust reaction growth, but also having it be translated into more top-line impact as well.</span></p><p><span>As far as the AI question is concerned, there&#8217;s a lot of layers to that, and I think it&#8217;s really, really important to set context here, which is what I did earlier as well with my my prepared remarks,</span></p><p><span>Like I said earlier, and I think there&#8217;s like a wide sort of recognition of that that AI is now a major structural tailwind for us, and because you know what these big AI models need is precisely what we have built over the years, and AI at this point, one way in one shape or form, is becoming pervasive across just about all of our customer segments.</span></p><p><span>At this point, you know there isn&#8217;t really a large project out there where AI isn&#8217;t like either a big driver or at least like a you know an an important influencer. And even small scale projects, I think in many instances are performed with an eye toward feeding the data into AI models, and so you know in some cases AI is a driver of demand. In some cases it&#8217;s an influencer, and sometimes an accelerator.</span></p><p><span>One issue here is that AI can mean a lot of different things, and also the landscape is changing quite fast, and so that&#8217;s why I went specifically in in a bit more detail in explaining how AI, for example, is used potentially in drug in the context of drug development for the parts specifically to measure biology. You know, if you think about the three stages of drug development: target ID, to understand the biology of what targets to go after, the chemistry; the middle part actually making the drug, the molecule; and then figuring out which patients to give the drug to. </span></p><div class="callout-block" data-callout="true"><p><span>The middle part is chemistry, where a lot of current AI investments up to now have been focused, but the big big opportunity is really around the biology, the target ID, and patient selection, and that&#8217;s where our tools are becoming are really really compelling and are becoming increasingly important. </span></p></div><p><span>And so there are some parts of our revenue where unambiguously AI revenue is coming from those, like tech bio companies, some large academic projects, but there&#8217;s also others where there is a mix of big pharma companies that we know are developing these AI models of biology, but also using our products for other for other goals, and same thing in academia, and so there&#8217;s a mix.</span></p><p><span>So right now at this stage, I&#8217;d say it&#8217;s still very early, but the opportunity is massive, and our products and technologies are particularly well positioned for this opportunity. And you know, as we go forward, and as these categories grow, we&#8217;ll provide more granular color on them and and and how to think about sort of numbers around them.</span></p><p><strong><span>Matt Larew (William Blair)</span></strong><span>  (38:03)</span></p><p><span>Hi, good afternoon. You referenced a number of the larger projects you&#8217;re working on with respect to AI, and also on the translational side. And in some cases, you know, customers adopting or increasing use of multiple platforms. I&#8217;m curious as you&#8217;re having these these discussions about larger projects, multi-year projects, kind of how important the suite of products that you have, and you know, software and analysis tools where there&#8217;s perhaps some integration or at least familiarity, you know, how that kind of ecosystem might be having an effect as customers think about you know longer term projects versus you know the merits of the platforms on their own.</span></p><p><strong><span>Saxonov</span></strong><span>  (38:48)</span></p><p><span>Yeah, really interesting question. Well, you know the first order answer I would say is that the platforms by themselves, whether you look at single-cell and spatial, have really strong merits just to stand on their own. I would say, and certainly is really appealing in many ways to our customers. You know, if you think about, for example, Flex Apex, really, really high sensitivity, incredible scalability, huge robustness. This is actually really important for AI in particular, a subtle point where it works across many different tissue types, many different cell types, many different contexts, and increasingly is becoming critical. So, if you want to build AI models that are useful that generalize, you really need to be able to measure lots of different contexts. You can&#8217;t be measuring the same cell line over and over again, for example, and Flex is incredibly great for that.</span></p><p><span>Also, another sort of emerging trend is, and maybe it&#8217;s a little bit your question too. Here is multiomics, being able to measure other modalities, and again, we have unmatched strength on that on along that dimension, and and yeah, certainly there is a there is an attractiveness to be able to do yeah to to train your models from a spatial perspective as well as from single-cell, and we certainly provide kind of these kinds of solutions to our customers, and also yes on the software side something we haven&#8217;t talked that much about, but of course we have invested in software fairly materially from the beginning of really the beginning of the company, and in particular is becoming important here because the data sets with Apex and with Atera are getting to be very large, especially for training AI models, and we have made quite a number of advances specifically to enable people to to run large-scale experiments in a straightforward kind of ergonomic manner.</span></p><p><span>So all of these pieces together do tie out to provide really compelling solutions for our customers, certainly much much more compelling than any other potential alternative on the market.</span></p><p><strong><span>Puneet Souda (Leerink)</span></strong><span>  (45:51)</span></p><p><span>Yeah, hi Serge and team. Thanks for taking my questions here. &#8230; On the AI side, I mean it does appear that the biology foundation models or the virtual cell models will require fundings in the scale of 100 million dollars or something closer in order to build the data for those models. Can you maybe just elaborate on what are the line of sight to the major large grants or funding sources right now that you see and the timing for those to land into you know 10x&#8217;s revenue. Thank you.</span></p><p><strong><span>Saxonov</span></strong><span>  (47:11)</span></p><p><span> [...] You know, as far as AI and funding is concerned, I think there&#8217;s a lot of work at the highest levels happening where I kind of spoke to that, where there&#8217;s a general kind of reappraisal of funding flows. </span></p><div class="callout-block" data-callout="true"><p><span>I think, in fact, a lot of large scale projects, anything that has to do with sort of large-scale science, is now having AI as a driver. </span></p><p>And if you think about it, kind of the fundamental model, if you want to understand biology using AI, you have to use single-cell and spatial because they are <em>the</em> scale technologies to measure biology, and so whether it&#8217;s the biopharma kind of world, or the world of academia, or various consortia, that&#8217;s sort of the case. </p></div><p><span>As people put in their priorities, whether it&#8217;s sort of from governments or from various philanthropic organizations, we anticipate that that will ultimately translate into you know more deployment of single-cell on spatial and ultimately more revenue to us.</span></p><p><strong><span>Operator</span></strong><span>  (57:21)</span></p><p><span>There are no further questions at this time. We have reached the end of the Q&amp;A session. This concludes today&#8217;s call. Thank you for attending. You may now disconnect.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[ Natera Q2 Revenue Jumps 38 Percent, Company Raises Full-Year Outlook by $100 Million]]></title><description><![CDATA[The cell-free DNA testing company processed approximately 283,000 Signatera tests en route to revenue of $752.8 million.]]></description><link>https://www.iongenomics.bio/p/natera-shares-jump-20-percent-on</link><guid isPermaLink="false">https://www.iongenomics.bio/p/natera-shares-jump-20-percent-on</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Fri, 07 Aug 2026 18:41:50 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!XaiA!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Natera said on Aug. 6 that its second quarter revenue rose 38 percent year over year, driven by strength in its Signatera test.</span></p><p><span>The Austin, Texas-based cell-free DNA and genetic testing company reported Q2 revenue of $752.8 million, up from $546.6 million in Q2 2025, beating the consensus Wall Street estimate. Product revenues grew 37 percent to $747.9 million from $544.4 million a year ago.</span></p><p><span>&#8220;We had an exceptional quarter helping patients, with over one million tests processed for the second consecutive quarter and record growth in oncology volumes,&#8221; CEO Steve Chapman said in a statement.</span></p><p><span>In Aug. 7 trading on the Nasdaq, shares of Natera were up 20 percent at $320.19.</span></p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!XaiA!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!XaiA!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!XaiA!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!XaiA!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!XaiA!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 1456w" sizes="100vw"><img src="https://substackcdn.com/image/fetch/$s_!XaiA!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png" width="822" height="604" data-attrs="{&quot;src&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/a93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png&quot;,&quot;srcNoWatermark&quot;:null,&quot;fullscreen&quot;:null,&quot;imageSize&quot;:null,&quot;height&quot;:604,&quot;width&quot;:822,&quot;resizeWidth&quot;:null,&quot;bytes&quot;:null,&quot;alt&quot;:&quot;TradingView chart&quot;,&quot;title&quot;:null,&quot;type&quot;:&quot;image/jpg&quot;,&quot;href&quot;:null,&quot;belowTheFold&quot;:false,&quot;topImage&quot;:true,&quot;internalRedirect&quot;:null,&quot;isProcessing&quot;:false,&quot;align&quot;:null,&quot;offset&quot;:false}" class="sizing-normal" alt="TradingView chart" title="TradingView chart" srcset="https://substackcdn.com/image/fetch/$s_!XaiA!,w_424,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!XaiA!,w_848,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!XaiA!,w_1272,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!XaiA!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa93bb602-5b10-4c2c-ade2-195a0cb0b371_822x604.png 1456w" sizes="100vw" fetchpriority="high"></picture><div class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" stroke-width="1.5" stroke="var(--color-fg-primary)" stroke-linecap="round" stroke-linejoin="round" xmlns="http://www.w3.org/2000/svg"><g><path d="M2.53001 7.81595C3.49179 4.73911 6.43281 2.5 9.91173 2.5C13.1684 2.5 15.9537 4.46214 17.0852 7.23684L17.6179 8.67647M17.6179 8.67647L18.5002 4.26471M17.6179 8.67647L13.6473 6.91176M17.4995 12.1841C16.5378 15.2609 13.5967 17.5 10.1178 17.5C6.86118 17.5 4.07589 15.5379 2.94432 12.7632L2.41165 11.3235M2.41165 11.3235L1.5293 15.7353M2.41165 11.3235L6.38224 13.0882"></path></g></svg></button><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container view-image"><svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-maximize2 lucide-maximize-2"><polyline points="15 3 21 3 21 9"></polyline><polyline points="9 21 3 21 3 15"></polyline><line x1="21" x2="14" y1="3" y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">Created with <a href="https://tradingview.com">TradingView</a></figcaption></figure></div><p><span>Natera processed approximately 1,040,000 tests in the quarter, up 22 percent from approximately 853,000  in Q2 2025. Oncology test volume grew 57 percent year over year to approximately 296,000 tests from approximately 188,000 a year ago. Signatera test volume grew 56 percent year over year to 283,000 clinical tests.</span></p><p><span>The company&#8217;s net loss for the quarter was $67.0 million, or $.47 per share, compared to a loss of $100.9 million, or $.74 per share, in Q2 2025, beating the consensus estimate for a loss of $.52 per share.</span></p><p><span>Natera&#8217;s R&amp;D expenses rose 56 percent to $228.1 million from $146.4 million in Q2 2025. SG&amp;A expenses rose 5 percent to $327.2 million from $310.5 million a year ago.</span></p><p><span>As of June 30, Natera had $1.09 billion in cash, cash equivalents, and restricted cash.</span></p><p><span>Natera raised its full-year 2026 revenue guidance by $100 million at the midpoint to $2.85 billion to $2.91 billion, from a prior range of $2.74 billion to $2.82 billion.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[10x Genomics Q2 Revenue Falls 13 Percent on Decline in Patent Suit Windfalls]]></title><description><![CDATA[The single-cell and spatial biology company reported Q2 revenue of $151.0 million, with a sharp decline in instrument revenue as customers await Atera.]]></description><link>https://www.iongenomics.bio/p/10x-genomics-q2-revenue-falls-13</link><guid isPermaLink="false">https://www.iongenomics.bio/p/10x-genomics-q2-revenue-falls-13</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Fri, 07 Aug 2026 13:03:30 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ljIy!,w_256,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><em><span>This story has been updated to correctly identify 10x&#8217;s CFO as Adam Taich, not Adam Laponis, who is CFO at Twist Bioscience. </span></em></p><p><span>10x Genomics said on Aug. 6 that its second quarter revenues fell 13 percent year over year, primarily due to a sharp decline in non-recurring patent litigation settlement revenue.</span></p><p><span>The Pleasanton, California-based single-cell and spatial biology company reported Q2 revenue of $151.0 million, down from $172.9 million in Q2 2025, beating the consensus Wall Street estimate of $146.6 million. Excluding $1.6 million and $27.3 million in non-recurring patent litigation settlement revenue in the respective periods, revenue grew 3 percent year over year.</span></p><p><span>Consumables revenue grew 7 percent to $130.8 million from $122.2 million a year ago, with single-cell consumables of $88.5 million up 3 percent and spatial consumables of $42.3 million up 16 percent. Instrument revenue fell 47 percent to $7.7 million from $14.5 million a year ago, reflecting a lull ahead of Atera shipments. Services revenue grew 26 percent to $10.7 million from $8.5 million. License and royalty revenue fell to $1.9 million from $27.8 million a year ago.</span></p><p><span>&#8220;The story of the quarter was the extraordinary customer response to Atera,&#8221; CEO Serge Saxonov said in a statement. &#8220;We are highly encouraged by the engagement across the research ecosystem and the very strong early order flow.&#8221;</span></p><p><span>On a conference call with investors following the release of results, CFO Adam Taich </span><s><span>Laponis</span></s><span> said he expects 10x  to ship around 40 Atera instruments in the second half of the year, mostly in the fourth quarter, and &#8220;booked orders [have] already greatly exceeded that full year number,&#8221; he said.</span></p><p class="button-wrapper" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe now&quot;,&quot;action&quot;:null,&quot;class&quot;:null}" data-component-name="ButtonCreateButton"><a class="button primary" href="https://www.iongenomics.bio/subscribe?"><span>Subscribe now</span></a></p><p><span>By region, Americas revenue fell 20 percent to $85.0 million from $106.2 million a year ago, with US revenue of $82.1 million down from $103.5 million a year ago, which included the bulk of the prior-year settlement payment. Excluding settlements, Americas revenue was up 6 percent.</span></p><p><span>Europe, Middle East, and Africa revenue grew 15 percent to $40.0 million from $34.7 million a year ago.</span></p><p><span>Asia-Pacific revenue fell 19 percent to $26.0 million from $32.0 million, reflecting a decline in China revenue to $15.0 million from $23.2 million a year ago.</span></p><p><span>The company&#8217;s net loss for the quarter was $17.9 million, or $.14 per share, compared to net income of $34.5 million, or $.28 per share, in Q2 2025, missing the consensus estimate of $.02 loss per share.</span></p><p><span>10x Genomics&#8217; R&amp;D expenses fell 7 percent to $56.8 million from $61.2 million in Q2 2025. SG&amp;A expenses rose 6 percent to $78.7 million from $74.4 million a year ago.</span></p><p><span>During the quarter, the company acquired Proteintech Genomics, a division of Proteintech Group.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;38fde8af-66f7-4894-b9b9-4d388a2e7712&quot;,&quot;caption&quot;:&quot;10x Genomics has acquired Proteintech Genomics from Chicagoland-based antibody maker Proteintech.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;10x Genomics Acquires Tech for Protein Detection Throughout Single Cells&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-06-09T15:38:27.621Z&quot;,&quot;cover_image&quot;:&quot;https://substackcdn.com/image/fetch/$s_!NckA!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa205bf78-e552-4cfc-bea4-2b491c47c348_822x604.png&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/10x-genomics-acquires-tech-for-protein&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:201318009,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p><span>It also announced multi-year research collaborations with Cleveland Clinic and Lausanne University Hospital focused on diagnostic applications of single cell and spatial technologies for cancer care.</span></p><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;68c4e705-243a-4cb1-b2db-9e03c941b33e&quot;,&quot;caption&quot;:&quot;10x Genomics and the Cleveland Clinic are collaborating on new diagnostics for bladder cancer based on 10x&#8217;s single-cell and spatial technologies.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;10x Genomics, Cleveland Clinic Collaborate on Single-Cell, Spatial Diagnostics&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-06-17T17:19:03.645Z&quot;,&quot;cover_image&quot;:&quot;https://substackcdn.com/image/fetch/$s_!sME9!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Facc8cf8d-76fe-4b86-8c04-c4aab3c2b9c9_822x604.png&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/10x-genomics-cleveland-clinic-collaborate&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:202464013,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:4,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><div class="digest-post-embed" data-attrs="{&quot;nodeId&quot;:&quot;38c20e61-470c-49dd-ad2d-2d1e6ea79aab&quot;,&quot;caption&quot;:&quot;This story has been updated to include additional comments from 10x Genomics.&quot;,&quot;cta&quot;:null,&quot;showBylines&quot;:true,&quot;showDescription&quot;:true,&quot;showImage&quot;:true,&quot;size&quot;:&quot;sm&quot;,&quot;isEditorNode&quot;:true,&quot;title&quot;:&quot;10x Genomics Partners With Swiss Hospital to Find Biomarkers Predicting Cancer Treatment Response&quot;,&quot;publishedBylines&quot;:[{&quot;id&quot;:212452349,&quot;name&quot;:&quot;Andrew P. Han&quot;,&quot;bio&quot;:null,&quot;photo_url&quot;:null,&quot;is_guest&quot;:false,&quot;bestseller_tier&quot;:null}],&quot;post_date&quot;:&quot;2026-07-29T17:44:39.879Z&quot;,&quot;cover_image&quot;:&quot;https://substackcdn.com/image/fetch/$s_!NwO8!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F13bd8174-e5db-4740-8e04-7242c3c4b327_3575x5005.jpeg&quot;,&quot;cover_image_alt&quot;:null,&quot;canonical_url&quot;:&quot;https://www.iongenomics.bio/p/10x-genomics-partners-with-swiss&quot;,&quot;section_name&quot;:null,&quot;video_upload_id&quot;:null,&quot;id&quot;:209006646,&quot;type&quot;:&quot;newsletter&quot;,&quot;reaction_count&quot;:0,&quot;comment_count&quot;:0,&quot;publication_id&quot;:8301988,&quot;publication_name&quot;:&quot;Ion Genomics&quot;,&quot;publication_logo_url&quot;:&quot;https://substackcdn.com/image/fetch/$s_!ljIy!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Fa4a7d6c0-26e2-487f-91fb-d03aac759778_1280x1280.png&quot;,&quot;belowTheFold&quot;:true,&quot;youtube_url&quot;:null,&quot;show_links&quot;:null,&quot;feed_url&quot;:null}"></div><p><span>As of June 30, 10x Genomics had $502.5 million in cash and cash equivalents and $49.5 million in marketable securities.</span></p><p><span>10x Genomics raised its full-year 2026 revenue guidance to $610 million to $630 million from a prior range of $600 million to $625 million.</span></p><p><span>&#8220;Customers are moderating purchases of existing spatial products in anticipation of Atera,&#8221; Laponis said. &#8220;We expect this spatial transition dynamic to continue into the third quarter, resulting in a modest sequential step down for our total revenue from Q2. We then expect a significant step up in the fourth quarter as Atera shipments ramp, and begin to contribute more meaningfully to revenue.&#8221;</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[PacBio Confirms Layoffs, Gets New CEO as Q2 Revenue Disappoints]]></title><description><![CDATA[Christian Henry stepped down as CEO, to be replaced by COO Mark Van Oene. Also, PacBio reduced its full-year revenue outlook.]]></description><link>https://www.iongenomics.bio/p/pacbio-q2-ceo-departs-layoffs-confirmed</link><guid isPermaLink="false">https://www.iongenomics.bio/p/pacbio-q2-ceo-departs-layoffs-confirmed</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Thu, 06 Aug 2026 21:18:51 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!wJL5!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Pacific Biosciences said on Aug. 5 that Christian Henry has stepped down as CEO, effective immediately, to be replaced by Mark Van Oene, formerly the Chief Operating Officer.</span></p><p><span>Henry will remain on the board and act as an advisor to Van Oene through the end of the year.</span></p><p><span>The announcement accompanied news that PacBio&#8217;s second quarter revenues fell 2 percent year over year, and confirmation that the company laid off 40 people last week, or approximately 8 percent of its workforce.</span></p><p><span>&#8220;My focus as CEO is straightforward: scale what&#8217;s driving growth, sharpen our execution, and run a leaner, more focused organization,&#8221; Van Oene said in his first remarks as CEO during a conference call with investors following the release of results. &#8220;I&#8217;ve spent five years in this business and understand both its potential and what it takes to realize it. I&#8217;m confident in our team, our technology, and our path forward,&#8221; he said.</span></p><p><span>Van Oene suggested that much of the reorganization was related to the company&#8217;s marketing activities and done to address clinical customers. &#8220;None of our key R&amp;D platform projects were impacted by this reorganization,&#8221; he added.</span></p><p><span>The long-read sequencing technology company reported Q2 revenue of $39.0 million, down from $39.8 million in Q2 2025, missing the consensus Wall Street estimate of $40.6 million.</span></p><p><span>Consumables revenue grew 6 percent year over year to $20.1 million from $18.9 million a year ago. Instrument revenue fell 10 percent to $12.8 million from $14.2 million a year ago. Service and other revenue declined 9 percent to $6.1 million from $6.7 million a year ago.</span></p><p><span>During Q2, PacBio placed 20 Revio systems and 26 Vega systems, compared to 15 Revio and 38 Vega placements in Q2 2025. &#8220;Overall, 60 percent of Revio placements in Q2 were to new customers, and 45 percent of Revio placements in Q2 were sold as a part of multi-instrument purchase orders,&#8221; Van Oene said.</span></p><p><span>Americas revenue was &#8220;down slightly&#8221; year over year at $17.6 million, CFO Jim Gibson said, &#8220;as ongoing NIH and broader academic funding uncertainty continued to weigh on capital purchasing decisions. Clinical and commercial customer activity remained resilient, and we continued expanding our Vega installed base within public health laboratories.&#8221;</span></p><p><span>Europe, Middle East, and Africa revenue of $14.4 million was up 52 percent year over year, driven by clinical adoption, demand for Vega instruments, and a multi-system Revio placement.</span></p><p><span>Asia-Pacific revenue fell 45 percent year over year to $7 million, &#8220;primarily reflecting the conclusion of a significant population sequencing program, continued academic and government funding headwinds, and the lower consumables demand as customers completed SPRQ-Nx workflow validation and worked through existing reagent inventory,&#8221; Gibson said.</span></p><p><span>The company&#8217;s net loss for the quarter was $44.7 million, or $.14 per share, compared to a loss of $41.9 million, or $.14 per share, in Q2 2025, in line with the consensus estimate of $.14 loss per share.</span></p><p><span>In Aug. 6 trading on the Nasdaq, shares of PacBio were down 10 percent at $1.17.</span></p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!wJL5!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!wJL5!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!wJL5!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!wJL5!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!wJL5!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 1456w" sizes="100vw"><img src="https://substackcdn.com/image/fetch/$s_!wJL5!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png" width="822" height="604" data-attrs="{&quot;src&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/f508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png&quot;,&quot;srcNoWatermark&quot;:null,&quot;fullscreen&quot;:null,&quot;imageSize&quot;:null,&quot;height&quot;:604,&quot;width&quot;:822,&quot;resizeWidth&quot;:null,&quot;bytes&quot;:null,&quot;alt&quot;:&quot;TradingView chart&quot;,&quot;title&quot;:null,&quot;type&quot;:&quot;image/jpg&quot;,&quot;href&quot;:null,&quot;belowTheFold&quot;:true,&quot;topImage&quot;:false,&quot;internalRedirect&quot;:null,&quot;isProcessing&quot;:false,&quot;align&quot;:null,&quot;offset&quot;:false}" class="sizing-normal" alt="TradingView chart" title="TradingView chart" srcset="https://substackcdn.com/image/fetch/$s_!wJL5!,w_424,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!wJL5!,w_848,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!wJL5!,w_1272,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!wJL5!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2Ff508e9de-9c70-4cd6-a44c-6a2fecb20f3d_822x604.png 1456w" sizes="100vw" loading="lazy"></picture><div class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" stroke-width="1.5" stroke="var(--color-fg-primary)" stroke-linecap="round" stroke-linejoin="round" xmlns="http://www.w3.org/2000/svg"><g><path d="M2.53001 7.81595C3.49179 4.73911 6.43281 2.5 9.91173 2.5C13.1684 2.5 15.9537 4.46214 17.0852 7.23684L17.6179 8.67647M17.6179 8.67647L18.5002 4.26471M17.6179 8.67647L13.6473 6.91176M17.4995 12.1841C16.5378 15.2609 13.5967 17.5 10.1178 17.5C6.86118 17.5 4.07589 15.5379 2.94432 12.7632L2.41165 11.3235M2.41165 11.3235L1.5293 15.7353M2.41165 11.3235L6.38224 13.0882"></path></g></svg></button><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container view-image"><svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-maximize2 lucide-maximize-2"><polyline points="15 3 21 3 21 9"></polyline><polyline points="9 21 3 21 3 15"></polyline><line x1="21" x2="14" y1="3" y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">Created with <a href="https://tradingview.com">TradingView</a></figcaption></figure></div><p><span>PacBio&#8217;s R&amp;D expenses rose 2 percent to $23.0 million from $22.5 million in Q2 2025. SG&amp;A expenses fell 8 percent to $33.4 million from $36.2 million a year ago.</span></p><p><span>As of June 30, PacBio had $236.9 million in cash and investments and $1.6 million in restricted cash.</span></p><p><span>PacBio cut its full-year 2026 revenue guidance to $155 million to $165 million from a prior range of $165 million to $175 million.</span></p><p><span>Van Oene will receive an annual base salary of $743,000 and a target annual bonus equal to 100 percent of his base salary.</span></p><p><span>PacBio said it expects to incur approximately $2.0 million in charges related to the layoffs, primarily consisting of severance and related costs, in Q3 2026.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! Subscribe for free to receive new posts and support my work.</p></div><form class="subscription-widget-subscribe"><input type="email" class="email-input" name="email" placeholder="Type your email&#8230;" tabindex="-1"><input type="submit" class="button primary" value="Subscribe"><div class="fake-input-wrapper"><div class="fake-input"></div><div class="fake-button"></div></div></form></div></div><p></p>]]></content:encoded></item><item><title><![CDATA[Another Cancer Testing Q2 Megapost: Grail, BillionToOne, Caris, Biodesix]]></title><description><![CDATA[BillionToOne shares fell sharply despite beating expectations, Caris plans MRD launch for second half, Grail FDA panel update.]]></description><link>https://www.iongenomics.bio/p/another-cancer-testing-q2-megapost</link><guid isPermaLink="false">https://www.iongenomics.bio/p/another-cancer-testing-q2-megapost</guid><dc:creator><![CDATA[Andrew P. Han]]></dc:creator><pubDate>Thu, 06 Aug 2026 18:55:39 GMT</pubDate><enclosure url="https://substackcdn.com/image/fetch/$s_!ENLL!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1b5dce2d-8ca0-43e5-9b67-36b6a4c8e73d_822x604.png" length="0" type="image/jpeg"/><content:encoded><![CDATA[<p><span>Four cancer diagnostics companies reported second-quarter results Aug. 5, with revenue growth across the group but different reactions from the stock market.</span></p><p><strong>Caris Life Sciences Shares Rise on 45 Percent Revenue Growth; MRD Launch Planned for Second Half</strong></p><p>Caris Life Sciences reported Q2 2026 revenue of $263.7 million, up 45 percent year over year from $181.4 million in Q2 2025. Molecular profiling services revenue grew 55 percent to $252.3 million from $162.9 million a year ago, driven by an 18 percent increase in clinical case volume to approximately 59,200 cases. Pharma research and development services revenue fell 38 percent to $11.5 million from $18.5 million a year ago.</p><p>During the Q&amp;A portion of a call with investors, Caris officials said they plan to finish validation of their whole-genome sequencing-based, tumor-informed minimal residual disease (MRD) test this year and seek to launch it in the second half of the year.</p><p>Net loss for the quarter was $637,000, or less than a penny per share, compared to a loss of $71.8 million, or $7.97 per share, in Q2 2025.</p><p>The company also announced a $100 million share repurchase program, of which approximately $82.1 million remains available.</p><p>As of June 30, Caris had $690.9 million in cash, cash equivalents and restricted cash, and $102.2 million in short-term marketable securities.</p><p>Caris raised its full-year 2026 revenue guidance to $1.03 billion to $1.04 billion, representing growth of 27 to 28 percent.</p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!ENLL!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1b5dce2d-8ca0-43e5-9b67-36b6a4c8e73d_822x604.png" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!ENLL!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1b5dce2d-8ca0-43e5-9b67-36b6a4c8e73d_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!ENLL!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1b5dce2d-8ca0-43e5-9b67-36b6a4c8e73d_822x604.png 848w, 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y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">Created with <a href="https://tradingview.com">TradingView</a></figcaption></figure></div><p><strong><span>Grail Revenue Up 26 Percent, Expects FDA Meeting to Review Galleri</span></strong></p><p><span>Grail reported Q2 revenue of $44.7 million, up 26 percent year over year from $35.5 million in Q2 2025. Galleri screening revenue grew 24 percent year over year to $42.6 million from $34.4 million a year ago, as Galleri test volume rose 35 percent year over year to more than 61,000 tests. Development services revenue grew to $2.0 million from $1.2 million.</span></p><p><span>&#8220;Grail continues to execute across our clinical and commercial priorities,&#8221; CEO Josh Ofman said in a statement. &#8220;We also expanded access through new and existing partnerships.&#8221;</span></p><p><span>Grail officials also announced that the FDA will hold an advisory committee meeting in the fall to review the company&#8217;s premarket approval (PMA) application for Galleri. Canaccord Genuity analyst Kyle Mikson noted that company officials continue to estimate FDA approval by early 2027. He added that the PMA submission is supported by data from the PATHFINDER 2 study and from the first year of the NHS-Galleri trial, noting that the primary endpoint across three years was not met.</span></p><p><span>Grail&#8217;s net loss for the quarter was $110.2 million, or $2.56 per share, compared to a loss of $114.0 million, or $3.18 per share, in Q2 2025. The quarter included a $25.4 million impairment charge related to a deferred asset recognized in connection with the company&#8217;s Samsung partnership.</span></p><p><span>As of June 30, GRAIL had $55.6 million in cash and cash equivalents, $806.0 million in short-term marketable securities, and $7.0 million in restricted cash.</span></p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!Iayj!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!Iayj!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!Iayj!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!Iayj!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!Iayj!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png 1456w" sizes="100vw"><img src="https://substackcdn.com/image/fetch/$s_!Iayj!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png" width="822" height="604" 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https://substackcdn.com/image/fetch/$s_!Iayj!,w_848,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!Iayj!,w_1272,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!Iayj!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F5171fb56-77b0-4d87-8513-2717fee02d7f_822x604.png 1456w" sizes="100vw" loading="lazy"></picture><div class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" stroke-width="1.5" stroke="var(--color-fg-primary)" stroke-linecap="round" stroke-linejoin="round" xmlns="http://www.w3.org/2000/svg"><g><path d="M2.53001 7.81595C3.49179 4.73911 6.43281 2.5 9.91173 2.5C13.1684 2.5 15.9537 4.46214 17.0852 7.23684L17.6179 8.67647M17.6179 8.67647L18.5002 4.26471M17.6179 8.67647L13.6473 6.91176M17.4995 12.1841C16.5378 15.2609 13.5967 17.5 10.1178 17.5C6.86118 17.5 4.07589 15.5379 2.94432 12.7632L2.41165 11.3235M2.41165 11.3235L1.5293 15.7353M2.41165 11.3235L6.38224 13.0882"></path></g></svg></button><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container view-image"><svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-maximize2 lucide-maximize-2"><polyline points="15 3 21 3 21 9"></polyline><polyline points="9 21 3 21 3 15"></polyline><line x1="21" x2="14" y1="3" y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">Created with <a href="https://tradingview.com">TradingView</a></figcaption></figure></div><p></p><p class="button-wrapper" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe now&quot;,&quot;action&quot;:null,&quot;class&quot;:null}" data-component-name="ButtonCreateButton"><a class="button primary" href="https://www.iongenomics.bio/subscribe?"><span>Subscribe now</span></a></p><p><strong><span>BillionToOne Shares Fall 38 Percent</span></strong></p><p><span>BillionToOne reported Q2 revenue of $109.4 million, up 64 percent year over year from $66.6 million in Q2 2025. Prenatal clinical testing revenue grew 55 percent to $94.2 million from $60.9 million a year ago. Oncology clinical testing revenue grew 176 percent to $13.7 million from $4.9 million a year ago. Total tests delivered grew 35 percent to 196,000.</span></p><p><span>Net income for the quarter was $8.1 million, or $.15 per diluted share, compared to a net loss of $246,000 in Q2 2025.</span></p><p><span>Despite the strong topline growth, shares fell nearly 40 percent to $90.93 in Aug. 6 trading on the Nasdaq. </span></p><div class="captioned-image-container"><figure><a class="image-link image2 is-viewable-img" target="_blank" href="https://substackcdn.com/image/fetch/$s_!CTTR!,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png" data-component-name="Image2ToDOM"><div class="image2-inset"><picture><source type="image/webp" srcset="https://substackcdn.com/image/fetch/$s_!CTTR!,w_424,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!CTTR!,w_848,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!CTTR!,w_1272,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!CTTR!,w_1456,c_limit,f_webp,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 1456w" sizes="100vw"><img src="https://substackcdn.com/image/fetch/$s_!CTTR!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png" width="822" height="604" data-attrs="{&quot;src&quot;:&quot;https://substack-post-media.s3.amazonaws.com/public/images/1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png&quot;,&quot;srcNoWatermark&quot;:null,&quot;fullscreen&quot;:null,&quot;imageSize&quot;:null,&quot;height&quot;:604,&quot;width&quot;:822,&quot;resizeWidth&quot;:null,&quot;bytes&quot;:null,&quot;alt&quot;:&quot;TradingView chart&quot;,&quot;title&quot;:null,&quot;type&quot;:&quot;image/jpg&quot;,&quot;href&quot;:null,&quot;belowTheFold&quot;:true,&quot;topImage&quot;:false,&quot;internalRedirect&quot;:null,&quot;isProcessing&quot;:false,&quot;align&quot;:null,&quot;offset&quot;:false}" class="sizing-normal" alt="TradingView chart" title="TradingView chart" srcset="https://substackcdn.com/image/fetch/$s_!CTTR!,w_424,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 424w, https://substackcdn.com/image/fetch/$s_!CTTR!,w_848,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 848w, https://substackcdn.com/image/fetch/$s_!CTTR!,w_1272,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 1272w, https://substackcdn.com/image/fetch/$s_!CTTR!,w_1456,c_limit,f_auto,q_auto:good,fl_progressive:steep/https%3A%2F%2Fsubstack-post-media.s3.amazonaws.com%2Fpublic%2Fimages%2F1887c7a5-2d9c-45e1-89df-3d472da07f9f_822x604.png 1456w" sizes="100vw" loading="lazy"></picture><div class="image-link-expand"><div class="pencraft pc-display-flex pc-gap-8 pc-reset"><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container restack-image"><svg aria-hidden="true" width="20" height="20" viewBox="0 0 20 20" fill="none" stroke-width="1.5" stroke="var(--color-fg-primary)" stroke-linecap="round" stroke-linejoin="round" xmlns="http://www.w3.org/2000/svg"><g><path d="M2.53001 7.81595C3.49179 4.73911 6.43281 2.5 9.91173 2.5C13.1684 2.5 15.9537 4.46214 17.0852 7.23684L17.6179 8.67647M17.6179 8.67647L18.5002 4.26471M17.6179 8.67647L13.6473 6.91176M17.4995 12.1841C16.5378 15.2609 13.5967 17.5 10.1178 17.5C6.86118 17.5 4.07589 15.5379 2.94432 12.7632L2.41165 11.3235M2.41165 11.3235L1.5293 15.7353M2.41165 11.3235L6.38224 13.0882"></path></g></svg></button><button tabindex="0" type="button" class="pencraft pc-reset pencraft icon-container view-image"><svg xmlns="http://www.w3.org/2000/svg" width="20" height="20" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-maximize2 lucide-maximize-2"><polyline points="15 3 21 3 21 9"></polyline><polyline points="9 21 3 21 3 15"></polyline><line x1="21" x2="14" y1="3" y2="10"></line><line x1="3" x2="10" y1="21" y2="14"></line></svg></button></div></div></div></a><figcaption class="image-caption">Created with <a href="https://tradingview.com">TradingView</a></figcaption></figure></div><p><span>In a note to investors, Guggenheim Securities analyst Subbu Nambi pointed to several factors that could have influenced investor sentiment, including $2.8 million worth of so-called &#8220;true-up&#8221; accounting measures and the fact that about $10 million in claims were held up by payers.</span></p><p><span>As of June 30, the company had $548.6 million in cash and cash equivalents.</span></p><p><strong><span>Biodesix</span></strong></p><p><span>Biodesix reported Q2 revenue of $26.9 million, up 34 percent from $20.0 million in Q2 2025. Diagnostic testing revenue grew 42 percent to $25.4 million from $17.9 million a year ago, driven by a 38 percent increase in test volumes to 20,900 tests. Development services revenue fell to $1.5 million from $2.1 million a year ago, reflecting timing of project completion and revenue recognition.</span></p><p><span>Net loss for the quarter was $7.3 million, or $.71 per share, compared to a loss of $11.5 million, or $1.56 per share, in Q2 2025.</span></p><p><span>&#8220;Our performance reflects continued adoption of our blood-based lung diagnostics, expanding reimbursement coverage, and improving sales force productivity,&#8221; CEO Scott Hutton said in a statement.</span></p><p><span>As of June 30, Biodesix had $30.0 million in cash and cash equivalents.</span></p><div class="subscription-widget-wrap-editor" data-attrs="{&quot;url&quot;:&quot;https://www.iongenomics.bio/subscribe?&quot;,&quot;text&quot;:&quot;Subscribe&quot;,&quot;language&quot;:&quot;en&quot;}" data-component-name="SubscribeWidgetToDOM"><div class="subscription-widget show-subscribe"><div class="preamble"><p class="cta-caption">Thanks for reading Ion Genomics! 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